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NC_062743.1__YP_010356505.1__M1M21_gp43__00067

Bact-Vir

NC_062743.1__YP_010356505.1__M1M21_gp43__00067

Identity

Accession:
NC_062743 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Elemovirus› Flavobacterium_phage_vB_FspP_elemoC_14-1A

TaxID: 2743803

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-87
PDB
Domain cluster: rep: JQ066768.1__AFA44869.1__RcapNL_00029__00029__D19-84
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7wdtA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 56.0 4.55e-01 100.0% 80.0%
4yarA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 51.0 4.38e-01 100.0% 56.9%
2xqxA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 54.0 4.42e-01 100.0% 97.3%
2b8mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 51.0 4.56e-01 100.0% 65.1%
2hyxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 53.0 4.56e-01 100.0% 94.7%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 49.0 4.51e-01 100.0% 66.7%
4jklA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 48.0 3.79e-01 92.2% 85.5%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 49.0 4.27e-01 100.0% 58.2%
7sf2D01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 4.03e-01 100.0% 86.0%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 49.0 4.30e-01 100.0% 59.0%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 52.0 4.24e-01 100.0% 94.7%
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 51.0 3.90e-01 100.0% 40.5%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.23e-01 100.0% 86.3%
4jx0A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 51.0 4.26e-01 100.0% 91.6%
1ji6A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 4.08e-01 100.0% 80.2%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 51.0 4.11e-01 100.0% 89.9%
4ba0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 38.0 4.29e-01 88.3% 100.0%
6l4cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 50.0 3.86e-01 100.0% 40.8%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 50.0 3.88e-01 100.0% 41.4%
3uesA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 4.41e-01 100.0% 98.4%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 48.0 4.15e-01 100.0% 57.1%
1j3qB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 50.0 3.89e-01 100.0% 47.0%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 4.13e-01 100.0% 71.1%
6ec6A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 50.0 3.88e-01 100.0% 89.7%
3ht1A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 47.0 3.98e-01 100.0% 50.7%
2pytA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 45.0 3.94e-01 100.0% 53.1%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 51.0 4.35e-01 100.0% 68.0%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 46.0 4.30e-01 100.0% 70.7%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 50.0 3.96e-01 100.0% 97.0%
6mvfA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 49.0 4.08e-01 100.0% 94.6%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 45.0 4.08e-01 100.0% 60.9%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 47.0 3.74e-01 100.0% 43.4%
1tq5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 48.0 4.21e-01 100.0% 60.0%
3fn9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 48.0 3.96e-01 100.0% 95.6%
5uj6A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 49.0 4.01e-01 100.0% 94.1%
2o8qA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 4.03e-01 100.0% 57.4%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 48.0 4.06e-01 100.0% 53.6%
2f4pA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 47.0 4.01e-01 100.0% 54.5%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 48.0 4.26e-01 100.0% 64.8%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 43.0 4.20e-01 100.0% 75.0%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 44.0 4.07e-01 100.0% 65.1%
1w9yA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.56 48.0 3.31e-01 100.0% 31.2%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.56 42.0 4.00e-01 80.5% 72.2%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 46.0 3.99e-01 100.0% 56.5%
6m9sD01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 4.18e-01 100.0% 70.3%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.21e-01 100.0% 81.2%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 46.0 3.96e-01 100.0% 56.5%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 48.0 4.23e-01 100.0% 65.0%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 4.09e-01 100.0% 67.3%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 4.25e-01 100.0% 83.0%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.54 36.0 3.07e-01 70.1% 42.8%
3t2lA02 2.60.40.2630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 36.0 3.01e-01 70.1% 86.3%
3myxB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 42.0 3.75e-01 100.0% 58.2%
3on7B00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.53 45.0 3.17e-01 100.0% 35.6%
3e97A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 43.0 3.66e-01 100.0% 53.5%
2mngA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 41.0 3.59e-01 100.0% 55.7%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.56e-01 90.9% 73.2%
2q7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.73e-01 94.8% 76.5%
1iv8A05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 36.0 3.78e-01 88.3% 90.9%
2z69B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 43.0 3.57e-01 100.0% 53.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3949882 10.39.1.1 ↗ beta sandwiches › jelly-roll › Soluble domain of MmpS4 › Soluble domain of MmpS4 › Mycobact_memb 0.71 50.0 4.75e-01 72.7% 75.3%
3957269 10.32.1.270 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mycobact_memb 0.71 50.0 4.79e-01 72.7% 75.9%
3223111 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.66 45.0 4.17e-01 71.4% 83.0%
3959989 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 56.0 4.43e-01 100.0% 54.7%
4640166 11.1.1.856 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RodZ_C 0.64 44.0 4.31e-01 71.4% 65.9%
3461676 10.32.1.212 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind 0.63 55.0 4.14e-01 100.0% 60.5%
3266260 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 4.82e-01 100.0% 88.6%
4950723 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 54.0 4.92e-01 100.0% 84.8%
5038285 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.61 53.0 4.14e-01 100.0% 50.0%
381831 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 51.0 4.81e-01 100.0% 76.3%
4407112 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 52.0 4.79e-01 100.0% 88.6%
5008219 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 50.0 4.66e-01 94.8% 93.0%
1393372 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 50.0 4.08e-01 100.0% 77.9%
223801 10.2.1.67 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Spike_JR1 0.59 51.0 5.01e-01 100.0% 91.9%
164729 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.59 49.0 4.42e-01 100.0% 67.0%
3600426 4076.3.1.3 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C 0.59 40.0 4.55e-01 74.0% 100.0%
200073 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.58 48.0 3.84e-01 100.0% 44.2%
4157339 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 48.0 4.31e-01 98.7% 100.0%
3725555 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.58 46.0 3.59e-01 100.0% 37.4%
3963751 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 45.0 4.19e-01 100.0% 66.7%
3633929 10.12.1.5 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.57 49.0 4.31e-01 100.0% 63.3%
4933556 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 46.0 4.17e-01 100.0% 64.5%
4006496 10.12.1.116 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30441 0.57 36.0 3.07e-01 80.5% 36.3%
4016056 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 45.0 3.68e-01 100.0% 43.0%
3637320 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 46.0 3.78e-01 100.0% 45.6%
3969466 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 44.0 3.87e-01 100.0% 55.8%
3696518 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.56 45.0 3.92e-01 100.0% 56.0%
3279782 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 42.0 3.74e-01 100.0% 53.3%
3726658 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 46.0 3.61e-01 100.0% 40.6%
3723066 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 48.0 3.67e-01 100.0% 39.9%
4532030 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 46.0 3.65e-01 100.0% 42.9%
None — 0.56 45.0 3.59e-01 100.0% 41.4%
331943 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.55 44.0 3.92e-01 100.0% 58.8%
4304839 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 46.0 3.80e-01 100.0% 48.4%
5049153 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 45.0 4.00e-01 100.0% 60.8%
3720434 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 47.0 3.68e-01 100.0% 42.7%
3734469 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 47.0 3.74e-01 100.0% 47.6%
4681454 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.55 46.0 3.62e-01 100.0% 41.7%
3972519 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.55 42.0 3.85e-01 100.0% 60.0%
3206860 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.55 46.0 4.28e-01 100.0% 73.1%
3195147 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.55 46.0 3.63e-01 100.0% 42.7%
3215294 10.12.1.97 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.55 44.0 3.58e-01 93.5% 88.5%
4982421 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.54 42.0 4.19e-01 100.0% 84.8%
3300460 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.54 43.0 3.16e-01 92.2% 44.5%
3193939 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 46.0 3.76e-01 100.0% 48.8%
3732427 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 46.0 3.66e-01 100.0% 45.4%
169603 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.54 41.0 4.03e-01 100.0% 75.3%
4878841 5077.1.1.2 ↗ extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › PsaD 0.54 36.0 3.11e-01 70.1% 43.9%
3698346 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 46.0 3.55e-01 100.0% 41.6%
3968655 10.12.1.27 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.53 42.0 3.84e-01 100.0% 64.2%
4022382 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 45.0 3.54e-01 100.0% 44.4%
None — 0.53 45.0 3.73e-01 100.0% 56.7%
3779679 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.53 40.0 2.72e-01 100.0% 20.6%
None — 0.52 45.0 3.70e-01 100.0% 56.7%
3721162 10.12.1.49 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_7 0.52 42.0 3.75e-01 94.8% 75.8%
2156522 12.1.1.50 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.51 41.0 3.48e-01 90.9% 66.9%
4266802 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.51 42.0 4.05e-01 93.5% 84.3%
3636139 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 40.0 3.96e-01 100.0% 85.0%
3637325 75.1.1.1 ↗ beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase 0.51 37.0 2.86e-01 83.1% 66.7%
3821948 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.50 38.0 3.11e-01 83.1% 69.7%