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NC_062744.1__YP_010356583.1__M1M22_gp060__00055
Bact-VirNC_062744.1__YP_010356583.1__M1M22_gp060__00055
Identity
- Accession:
- NC_062744 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
TaxID: 2745643
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-142
Domain cluster:
rep: IMGVR_UViG_3300025630_003131-3300025630-Ga0208004_100049516__D37-144
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.86 | 80.0 | 6.75e-01 | 96.7% | 81.4% |
| 2dqaA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.85 | 75.0 | 7.52e-01 | 98.3% | 91.1% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.82 | 78.0 | 6.82e-01 | 100.0% | 89.9% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.81 | 71.0 | 6.40e-01 | 92.5% | 77.5% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.81 | 76.0 | 6.64e-01 | 100.0% | 78.0% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 73.0 | 6.26e-01 | 97.5% | 85.2% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 75.0 | 6.75e-01 | 100.0% | 81.6% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.79 | 74.0 | 6.64e-01 | 100.0% | 85.1% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 49.0 | 5.13e-01 | 95.0% | 72.2% |
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 58.0 | 5.38e-01 | 98.3% | 92.2% |
| 3k1zA02 | 1.10.150.720 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Haloacid dehalogenase-like hydrolase | 0.60 | 38.0 | 4.46e-01 | 97.5% | 91.7% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 40.0 | 4.52e-01 | 100.0% | 98.9% |
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 37.0 | 3.43e-01 | 70.0% | 62.7% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 33.0 | 3.94e-01 | 92.5% | 100.0% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 29.0 | 3.37e-01 | 90.0% | 79.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 82.0 | 6.86e-01 | 100.0% | 80.5% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 77.0 | 6.55e-01 | 95.0% | 79.5% |
| 4995668 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 76.0 | 7.57e-01 | 94.2% | 95.9% |
| 3317412 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 6.63e-01 | 100.0% | 62.0% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 79.0 | 6.82e-01 | 98.3% | 86.3% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 79.0 | 6.76e-01 | 100.0% | 85.0% |
| 3254511 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.83 | 57.0 | 6.11e-01 | 96.7% | 80.0% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 70.0 | 6.21e-01 | 89.2% | 82.4% |
| 3381140 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.82 | 74.0 | 6.38e-01 | 100.0% | 63.9% |
| 4031083 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.81 | 49.0 | 6.01e-01 | 87.5% | 92.5% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.81 | 76.0 | 6.64e-01 | 100.0% | 79.4% |
| 3289359 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 75.0 | 6.49e-01 | 100.0% | 77.8% |
| 3838879 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 76.0 | 6.99e-01 | 100.0% | 82.6% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 73.0 | 6.18e-01 | 97.5% | 82.0% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.79 | 75.0 | 6.61e-01 | 100.0% | 78.2% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 73.0 | 6.39e-01 | 100.0% | 81.2% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 70.0 | 6.05e-01 | 100.0% | 77.8% |
| 3782341 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.55 | 37.0 | 3.42e-01 | 98.3% | 50.6% |
| 3741853 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.54 | 35.0 | 3.95e-01 | 96.7% | 85.6% |
| 3323926 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.53 | 35.0 | 3.79e-01 | 80.0% | 80.0% |
| 3595345 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.50 | 35.0 | 3.90e-01 | 95.0% | 94.4% |