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NC_062744.1__YP_010356607.1__M1M22_gp036__00079
Bact-VirNC_062744.1__YP_010356607.1__M1M22_gp036__00079
Identity
- Accession:
- NC_062744 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Taxonomy
TaxID: 2745643
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-14_33-90
Domain cluster:
rep: MW073017.1__QPB08573.1__X__00094__D7-13_31-89
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.81 | 75.0 | 6.43e-01 | 100.0% | 85.0% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.80 | 75.0 | 6.43e-01 | 100.0% | 87.8% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 42.0 | 4.18e-01 | 87.9% | 61.8% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 42.0 | 4.21e-01 | 87.9% | 64.2% |
| 1o89A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.65 | 59.0 | 4.46e-01 | 100.0% | 54.9% |
| 4jxkA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.64 | 59.0 | 4.33e-01 | 100.0% | 51.9% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 40.0 | 4.23e-01 | 87.9% | 71.2% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 39.0 | 4.16e-01 | 87.9% | 71.9% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 40.0 | 4.03e-01 | 87.9% | 64.6% |
| 6uy8A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 39.0 | 4.13e-01 | 87.9% | 72.9% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 4.10e-01 | 92.4% | 68.2% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 39.0 | 3.67e-01 | 87.9% | 52.5% |
| 2exdA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 41.0 | 4.02e-01 | 98.5% | 63.5% |
| 2qsfA03 | 3.30.60.290 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Rad4, beta-hairpin domain BHD2 | 0.61 | 36.0 | 4.21e-01 | 97.0% | 100.0% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 39.0 | 4.11e-01 | 90.9% | 73.3% |
| 4azsA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 35.0 | 2.77e-01 | 93.9% | 30.3% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.68e-01 | 77.3% | 76.5% |
| 3go5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 4.03e-01 | 86.4% | 82.3% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.32e-01 | 87.9% | 61.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 34.0 | 3.38e-01 | 86.4% | 67.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4182470 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.86 | 80.0 | 7.01e-01 | 100.0% | 89.4% |
| 3252896 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.82 | 78.0 | 6.73e-01 | 100.0% | 91.6% |
| 4147631 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.82 | 77.0 | 7.31e-01 | 100.0% | 88.0% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.79 | 74.0 | 6.30e-01 | 100.0% | 86.0% |
| 3175923 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.78 | 73.0 | 6.22e-01 | 100.0% | 86.0% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.77 | 71.0 | 6.10e-01 | 100.0% | 91.0% |
| 5047353 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.68 | 57.0 | 4.64e-01 | 92.4% | 76.0% |
| 3191619 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.68 | 61.0 | 4.38e-01 | 100.0% | 52.1% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.65 | 41.0 | 4.06e-01 | 87.9% | 60.0% |
| 3941133 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 40.0 | 3.89e-01 | 89.4% | 54.7% |
| 3554293 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.64 | 41.0 | 4.14e-01 | 87.9% | 66.2% |
| 3713613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 40.0 | 4.03e-01 | 87.9% | 69.2% |
| 3389015 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 3.84e-01 | 87.9% | 73.0% |
| 5052314 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 46.0 | 4.15e-01 | 100.0% | 76.8% |
| 3684460 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.53 | 31.0 | 2.81e-01 | 93.9% | 38.9% |
| 3504834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 32.0 | 3.39e-01 | 90.9% | 70.7% |