←Back to structures

NC_062744.1__YP_010356608.1__M1M22_gp035__00080

Bact-Vir

NC_062744.1__YP_010356608.1__M1M22_gp035__00080

Identity

Accession:
NC_062744 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pervagoviridae› Callevirus› Cellulophaga_phage_Calle_1

TaxID: 2745643

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 55-88
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ednA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.82 70.0 4.46e-01 100.0% 22.0%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.81 61.0 3.96e-01 100.0% 19.2%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.79 61.0 3.83e-01 100.0% 16.6%
3ijlA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.79 65.0 4.67e-01 100.0% 38.9%
2daxA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.78 66.0 4.39e-01 100.0% 27.0%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.77 57.0 4.87e-01 100.0% 48.3%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.76 57.0 4.20e-01 100.0% 30.0%
3akoC00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.76 61.0 4.11e-01 100.0% 22.8%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 64.0 4.50e-01 100.0% 32.1%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 61.0 3.98e-01 100.0% 22.2%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.74 61.0 4.46e-01 97.1% 37.0%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 60.0 4.37e-01 100.0% 34.3%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 61.0 3.51e-01 100.0% 10.8%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.73 61.0 3.62e-01 100.0% 13.8%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 53.0 3.83e-01 100.0% 26.6%
1f06A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.72 58.0 4.00e-01 100.0% 91.3%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.72 56.0 4.02e-01 100.0% 71.1%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.71 53.0 3.32e-01 100.0% 13.7%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.70 59.0 5.48e-01 100.0% 87.0%
4cllA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.70 56.0 3.53e-01 100.0% 60.0%
4mj3B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.70 55.0 3.27e-01 100.0% 20.5%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.69 56.0 4.09e-01 100.0% 36.4%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.69 52.0 4.19e-01 100.0% 40.5%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.69 53.0 3.54e-01 100.0% 21.1%
2opjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 58.0 4.39e-01 100.0% 39.5%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 52.0 3.62e-01 100.0% 23.5%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.69 54.0 3.36e-01 100.0% 15.7%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.68 53.0 3.57e-01 100.0% 22.1%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 56.0 3.86e-01 100.0% 26.8%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.68 48.0 3.60e-01 100.0% 29.0%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 56.0 3.93e-01 100.0% 29.3%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.67 54.0 3.91e-01 100.0% 73.3%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.67 52.0 3.93e-01 100.0% 32.1%
7xoiD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 55.0 3.93e-01 100.0% 32.7%
4wrnA03 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.66 55.0 3.55e-01 100.0% 52.3%
3po3S02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 48.0 3.94e-01 100.0% 40.5%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.65 53.0 3.16e-01 97.1% 19.7%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 52.0 3.76e-01 100.0% 30.7%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 48.0 4.74e-01 100.0% 78.9%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 48.0 4.00e-01 100.0% 43.5%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 50.0 3.52e-01 100.0% 25.4%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 51.0 4.00e-01 100.0% 40.5%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 51.0 2.83e-01 100.0% 6.5%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 53.0 3.03e-01 100.0% 10.5%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 51.0 3.67e-01 100.0% 31.9%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.63 47.0 4.47e-01 100.0% 66.7%
4fumA01 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.63 49.0 4.06e-01 100.0% 79.7%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 47.0 3.64e-01 91.2% 34.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.17e-01 100.0% 50.8%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 46.0 3.76e-01 100.0% 39.2%
2ltjA00 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.63 50.0 3.67e-01 100.0% 51.4%
4f78A01 3.30.200.180 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.63 50.0 3.71e-01 100.0% 51.0%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.63 47.0 3.90e-01 100.0% 43.2%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.62 43.0 2.75e-01 73.5% 34.8%
2v8qB00 6.20.250.60 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.62 45.0 3.79e-01 100.0% 42.5%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 46.0 4.58e-01 100.0% 83.8%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.62 48.0 3.43e-01 100.0% 27.2%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 44.0 3.27e-01 100.0% 26.1%
3a0rA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 50.0 3.64e-01 100.0% 34.9%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.61 48.0 2.94e-01 100.0% 12.1%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 47.0 3.76e-01 100.0% 42.3%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 47.0 3.60e-01 100.0% 61.4%
2o95B00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 45.0 3.03e-01 100.0% 21.0%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 3.66e-01 100.0% 69.2%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 43.0 3.18e-01 100.0% 25.9%
5n1tA03 3.90.760.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain 0.59 44.0 3.84e-01 100.0% 50.7%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 45.0 3.21e-01 100.0% 30.2%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 48.0 3.23e-01 100.0% 23.4%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.58 45.0 3.44e-01 97.1% 39.4%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 42.0 3.28e-01 100.0% 33.0%
1vybA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.56 39.0 2.48e-01 100.0% 11.4%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 39.0 2.89e-01 100.0% 23.7%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.56 44.0 3.43e-01 100.0% 38.0%
3licA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 43.0 2.87e-01 97.1% 20.8%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 38.0 2.39e-01 100.0% 9.9%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.55 39.0 2.58e-01 100.0% 60.7%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.54 41.0 3.45e-01 100.0% 44.9%
4ckbD03 2.40.50.830 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 40.0 2.88e-01 97.1% 30.6%
8hi1E01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.29e-01 100.0% 80.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 36.0 2.51e-01 100.0% 32.8%
1ihjA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 38.0 3.13e-01 100.0% 53.2%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 3.64e-01 100.0% 100.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 41.0 3.29e-01 100.0% 45.6%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.33e-01 94.1% 51.5%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 3.52e-01 100.0% 97.0%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 35.0 2.12e-01 79.4% 7.7%
3lnnA01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.51 39.0 3.10e-01 100.0% 50.5%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518369 11.1.4.92 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VPS13_VAB 0.86 75.0 5.24e-01 100.0% 32.4%
4379266 316.1.1.1 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.85 73.0 4.60e-01 100.0% 20.0%
3425789 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.85 71.0 4.08e-01 100.0% 10.6%
3386302 3186.1.1.1 ↗ a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook 0.83 68.0 5.07e-01 100.0% 37.6%
4343392 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.82 69.0 4.85e-01 100.0% 30.9%
3658860 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.80 62.0 3.75e-01 100.0% 13.6%
3696336 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.80 63.0 4.68e-01 94.1% 33.7%
5844 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.80 64.0 4.45e-01 100.0% 27.4%
3730099 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.80 60.0 4.80e-01 100.0% 40.5%
3466098 5.1.4.101 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1618 0.79 65.0 3.78e-01 100.0% 11.6%
3954323 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.79 65.0 3.76e-01 100.0% 10.1%
3334359 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 65.0 4.15e-01 100.0% 20.0%
3458138 375.1.1.131 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF702 0.79 65.0 5.38e-01 100.0% 53.8%
3352475 330.3.1.0 ↗ a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.78 66.0 5.21e-01 100.0% 48.0%
3701675 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.78 64.0 5.25e-01 100.0% 64.7%
4964487 218.1.1.12 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › PF26684 0.78 64.0 4.56e-01 100.0% 30.9%
3881440 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.77 63.0 4.36e-01 100.0% 27.2%
3650660 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.77 66.0 4.40e-01 100.0% 29.1%
5030959 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.77 60.0 4.73e-01 100.0% 40.0%
5021263 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.76 53.0 3.59e-01 76.5% 25.6%
5055065 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 65.0 5.02e-01 100.0% 77.3%
3223921 2484.1.1.259 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.75 60.0 4.57e-01 100.0% 41.1%
4028464 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 58.0 3.44e-01 100.0% 10.9%
3413293 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 52.0 2.95e-01 100.0% 7.1%
3797649 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.74 59.0 4.29e-01 100.0% 32.7%
5055297 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 60.0 4.64e-01 100.0% 40.0%
4995163 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 57.0 3.46e-01 97.1% 13.8%
3390712 827.1.1.0 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain 0.73 58.0 4.48e-01 100.0% 38.9%
3597874 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 55.0 4.26e-01 100.0% 35.6%
3670792 243.3.1.67 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Phytochelatin_C 0.73 60.0 5.02e-01 100.0% 52.3%
3497120 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 54.0 4.08e-01 100.0% 31.6%
4878467 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.73 57.0 4.36e-01 100.0% 35.4%
4859328 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.72 56.0 3.91e-01 100.0% 24.3%
3941629 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.72 59.0 3.32e-01 97.1% 7.4%
3517477 2484.1.1.230 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.72 57.0 4.22e-01 100.0% 33.3%
3818481 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 59.0 3.64e-01 100.0% 15.7%
4927936 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 58.0 4.51e-01 100.0% 40.0%
3498476 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 59.0 3.17e-01 100.0% 4.2%
5024241 330.2.1.5 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.72 58.0 4.33e-01 100.0% 35.8%
3993689 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.72 56.0 4.59e-01 100.0% 45.3%
4124096 809.1.1.1 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.71 58.0 4.54e-01 100.0% 73.8%
3270992 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.71 59.0 3.96e-01 100.0% 26.4%
3314075 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.70 58.0 4.25e-01 100.0% 34.3%
1272104 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.70 61.0 4.40e-01 100.0% 38.5%
5000727 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 56.0 4.88e-01 94.1% 67.3%
5043504 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 56.0 5.06e-01 100.0% 64.0%
3650158 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.70 56.0 4.19e-01 100.0% 34.3%
4002646 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 55.0 3.33e-01 100.0% 12.3%
3614844 220.1.1.15 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 0.69 57.0 3.87e-01 100.0% 24.3%
3451905 5015.1.1.0 ↗ extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex 0.69 59.0 5.28e-01 100.0% 68.0%
3259407 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 56.0 4.37e-01 100.0% 40.0%
5065441 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 59.0 5.15e-01 100.0% 64.2%
5029914 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.68 54.0 4.80e-01 100.0% 60.0%
3292852 4086.1.1.1 ↗ a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI 0.68 53.0 4.01e-01 100.0% 33.7%
3488611 383.1.2.0 ↗ few secondary structure elements › Defensin-like › Defensin-related › Laterosporulin 0.68 55.0 5.36e-01 100.0% 85.0%
None — 0.68 54.0 3.07e-01 100.0% 7.2%
5058918 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 55.0 3.92e-01 100.0% 29.6%
5056130 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.67 55.0 4.11e-01 100.0% 35.8%
5000550 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.66 52.0 3.09e-01 100.0% 10.2%
4661118 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.66 54.0 3.78e-01 100.0% 28.8%
3313814 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.66 54.0 3.48e-01 100.0% 20.0%
5041112 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 51.0 4.19e-01 100.0% 45.7%
3787118 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.65 55.0 3.17e-01 100.0% 9.5%
5023443 330.4.1.0 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.65 52.0 4.33e-01 100.0% 49.2%
3723691 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.65 53.0 3.03e-01 100.0% 9.2%
3297925 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 53.0 4.49e-01 100.0% 60.0%
3315173 243.3.1.46 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM 0.64 52.0 3.73e-01 100.0% 29.6%
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.13e-01 97.1% 47.1%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 51.0 4.26e-01 100.0% 52.3%
4935679 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.63 52.0 3.94e-01 100.0% 37.8%
4968392 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.62 52.0 3.83e-01 100.0% 34.0%
4957407 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.62 51.0 3.55e-01 100.0% 26.2%
3904071 214.1.1.11 ↗ a+b two layers › SH2 › SH2 › SH2 › PF27628 0.62 48.0 3.45e-01 100.0% 26.7%
3492415 4086.1.1.1 ↗ a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI 0.62 46.0 3.79e-01 100.0% 41.3%
3511010 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.62 50.0 5.01e-01 100.0% 91.4%
4937410 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.62 52.0 3.88e-01 100.0% 35.8%
3932703 11.2.1.50 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 0.62 48.0 3.67e-01 100.0% 35.1%
184719 3514.1.1.1 ↗ a+b two layers › uncharacterized protein PA1076 › uncharacterized protein PA1076 › uncharacterized protein PA1076 › DUF5064 0.62 48.0 3.43e-01 100.0% 27.2%
4970648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 46.0 4.34e-01 100.0% 66.0%
4952885 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.61 49.0 3.75e-01 100.0% 35.8%
5002447 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.60 50.0 3.75e-01 100.0% 35.8%
4965521 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.60 48.0 3.53e-01 100.0% 30.9%
4950394 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.59 50.0 3.65e-01 100.0% 32.4%
4599318 2.1.1.299 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 0.59 45.0 3.69e-01 100.0% 45.0%
4175900 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.58 49.0 3.93e-01 100.0% 84.0%
4337382 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.57 48.0 3.85e-01 100.0% 85.3%
3389979 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 43.0 3.18e-01 100.0% 30.0%
3882182 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.56 40.0 3.02e-01 100.0% 27.7%
3888254 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.97e-01 100.0% 68.9%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.55 44.0 3.66e-01 100.0% 49.2%
3211024 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.53 41.0 3.10e-01 100.0% 37.1%
3970828 2.7.1.0 ↗ beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N 0.52 41.0 2.66e-01 100.0% 42.6%
4632710 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.47e-01 100.0% 68.9%