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NC_062751.1__YP_010357230.1__M1M29_gp181__00181

Bact-Vir

NC_062751.1__YP_010357230.1__M1M29_gp181__00181

Identity

Accession:
NC_062751 ↗
Kingdom:
phage

Quality

67.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Molycolviridae› Mollyvirus› Maribacter_phage_Molly_1

TaxID: 2745685

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cvhA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.54 39.0 2.61e-01 78.8% 80.7%
1mhyD00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.53 40.0 2.38e-01 90.4% 33.9%
2aeeB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 36.0 2.44e-01 71.2% 59.6%
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.52 35.0 2.25e-01 73.1% 59.1%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 40.0 2.40e-01 88.5% 83.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4029446 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.66 45.0 3.03e-01 75.0% 18.5%
4025072 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 42.0 3.41e-01 80.8% 40.0%
5080803 4040.1.1.1 ↗ alpha bundles › Fic-like › Fic-like › Fic-like › Fic 0.57 46.0 2.99e-01 92.3% 22.7%
3796214 633.3.1.1 ↗ alpha bundles › Bromodomain-like › Mob1/phocein › Mob1/phocein › Mob1_phocein 0.54 40.0 2.69e-01 76.9% 29.5%
3227370 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.52 41.0 3.32e-01 98.1% 96.8%
3220832 592.7.1.1 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.52 41.0 3.47e-01 88.5% 83.3%