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NC_062752.1__YP_010357266.1__M1M30_gp017__00017

Bact-Vir

NC_062752.1__YP_010357266.1__M1M30_gp017__00017

Identity

Accession:
NC_062752 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-208
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.89 71.0 7.79e-01 92.0% 98.1%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.87 62.0 7.30e-01 92.0% 100.0%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.83 72.0 7.57e-01 92.5% 98.3%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 72.0 7.34e-01 92.5% 100.0%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.79 62.0 6.93e-01 88.8% 100.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.79 61.0 6.79e-01 90.9% 100.0%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.77 55.0 6.01e-01 89.3% 87.7%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.75 67.0 6.51e-01 92.0% 99.0%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.72 62.0 5.33e-01 91.4% 100.0%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.69 48.0 5.19e-01 82.9% 82.8%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.69 60.0 5.59e-01 91.4% 100.0%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.69 59.0 5.69e-01 91.4% 100.0%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.67 43.0 5.02e-01 80.7% 90.8%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.66 58.0 5.07e-01 92.5% 96.3%
2lhfA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.65 57.0 5.87e-01 92.0% 100.0%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.64 56.0 4.69e-01 92.0% 90.9%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.64 56.0 5.05e-01 92.0% 100.0%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 57.0 4.78e-01 97.3% 90.8%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 54.0 4.67e-01 92.0% 88.9%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.59 46.0 4.45e-01 81.3% 90.5%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 42.0 3.59e-01 84.5% 46.5%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.57 52.0 4.45e-01 97.3% 100.0%
2rckA01 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.57 53.0 5.01e-01 97.9% 90.4%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 46.0 3.64e-01 83.4% 57.5%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.56 46.0 3.71e-01 85.0% 98.5%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.56 50.0 3.81e-01 95.7% 94.6%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.55 49.0 4.38e-01 92.5% 100.0%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.55 50.0 3.74e-01 96.8% 95.3%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 43.0 3.33e-01 83.4% 50.4%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 45.0 3.57e-01 88.8% 91.9%
5dl5A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 44.0 3.37e-01 86.1% 94.0%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 44.0 3.02e-01 85.6% 41.3%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.53 45.0 4.39e-01 89.3% 86.8%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 4.44e-01 84.0% 99.3%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 43.0 3.04e-01 85.0% 33.5%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 43.0 3.02e-01 84.5% 30.5%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 43.0 3.02e-01 84.5% 43.1%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.52 43.0 3.40e-01 85.0% 61.2%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.52 44.0 3.41e-01 89.3% 98.3%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 42.0 2.89e-01 84.5% 36.1%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 42.0 2.86e-01 84.5% 31.3%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.52 44.0 3.99e-01 89.8% 96.4%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 42.0 3.02e-01 85.0% 41.8%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.52 44.0 3.66e-01 87.7% 90.3%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 41.0 2.93e-01 84.5% 48.1%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 41.0 2.90e-01 82.9% 31.1%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 41.0 3.12e-01 84.0% 42.4%
2w16A03 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 41.0 2.91e-01 84.5% 43.3%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 39.0 2.71e-01 80.2% 95.6%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 41.0 2.92e-01 85.0% 40.8%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.50 46.0 4.23e-01 100.0% 94.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3165475 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.86 71.0 7.74e-01 90.9% 100.0%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.83 74.0 6.72e-01 90.9% 100.0%
4531587 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.83 78.0 7.28e-01 97.3% 97.8%
3840054 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.83 61.0 7.09e-01 80.2% 100.0%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.83 70.0 7.40e-01 95.2% 95.9%
4283551 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.83 79.0 7.56e-01 98.9% 91.9%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.82 73.0 7.34e-01 91.4% 100.0%
4301927 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.82 74.0 6.78e-01 93.0% 96.5%
4224449 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.81 73.0 7.60e-01 92.0% 98.9%
4042627 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.81 71.0 7.48e-01 92.0% 100.0%
3388060 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.81 72.0 7.22e-01 91.4% 100.0%
3838382 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.81 71.0 6.26e-01 90.9% 89.6%
4130771 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.81 75.0 7.57e-01 100.0% 96.8%
3838980 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.79 68.0 6.98e-01 88.8% 100.0%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.79 63.0 6.92e-01 91.4% 100.0%
3980016 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.79 58.0 6.67e-01 86.1% 100.0%
3839251 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.79 69.0 6.95e-01 90.4% 95.1%
4512746 5084.1.1.9 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.78 62.0 6.75e-01 92.0% 95.6%
3838398 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.78 69.0 7.04e-01 90.4% 95.0%
145377 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.78 61.0 6.81e-01 91.4% 99.3%
4222629 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.77 62.0 6.86e-01 89.3% 100.0%
3839432 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.77 67.0 6.43e-01 90.9% 89.0%
4537321 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.76 66.0 6.74e-01 92.0% 92.2%
4636309 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 64.0 6.14e-01 92.0% 100.0%
3970312 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.71 63.0 6.45e-01 92.0% 98.9%
884 5084.2.1.2 beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › OpcA 0.69 60.0 5.59e-01 91.4% 100.0%
3506244 5084.1.1.16 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.67 58.0 6.03e-01 90.9% 100.0%
4234836 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 57.0 4.76e-01 92.0% 85.9%
3967388 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 57.0 4.72e-01 93.0% 87.6%
4010029 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 57.0 4.78e-01 93.0% 86.6%
4521584 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 57.0 4.68e-01 93.0% 86.8%
4643284 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 57.0 4.72e-01 93.0% 87.9%
4379627 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 56.0 4.63e-01 90.9% 87.4%
382272 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 56.0 4.68e-01 93.0% 87.6%
4150627 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 56.0 4.68e-01 93.0% 89.6%
4191031 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.63 56.0 4.63e-01 92.0% 87.4%
4038477 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.63 55.0 4.54e-01 90.9% 85.4%
3164364 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 56.0 4.76e-01 93.0% 86.5%
4162922 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 55.0 4.57e-01 92.5% 86.5%
4347483 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 54.0 4.34e-01 92.0% 77.2%
1294369 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 57.0 4.78e-01 97.3% 90.8%
3386238 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 54.0 4.45e-01 91.4% 81.9%
4318781 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 55.0 4.49e-01 92.0% 91.5%
4009893 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 57.0 4.81e-01 98.4% 88.7%
3387574 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.61 53.0 4.47e-01 92.0% 87.7%
4304754 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 55.0 4.64e-01 97.9% 88.2%
3965241 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.58 46.0 3.81e-01 84.5% 48.4%
3165307 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.57 50.0 3.75e-01 91.4% 95.6%
1558583 5084.5.4.2 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › CymA 0.57 51.0 4.18e-01 92.0% 96.5%
3615728 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.57 47.0 3.57e-01 86.6% 46.8%
3980621 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.56 46.0 4.42e-01 85.6% 79.1%
4102065 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 51.0 4.42e-01 96.8% 68.7%
3971597 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.55 46.0 3.76e-01 88.2% 57.9%
2410570 5084.5.1.14 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DcaP 0.54 44.0 3.56e-01 84.5% 53.2%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.54 46.0 4.48e-01 89.3% 86.2%
4368670 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.54 45.0 3.47e-01 86.6% 96.0%
4582939 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.54 46.0 3.80e-01 89.8% 77.2%
3942536 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 42.0 3.33e-01 84.0% 42.5%
3942118 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.53 45.0 3.41e-01 89.3% 96.7%
3965077 5084.4.1.1 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 0.53 44.0 3.87e-01 87.2% 70.7%
4371754 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 43.0 2.99e-01 85.0% 39.0%
3387592 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.53 44.0 3.55e-01 87.7% 55.9%
1761798 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 43.0 3.02e-01 84.5% 43.1%
4064323 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.53 45.0 3.39e-01 89.3% 93.7%
3967564 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.52 44.0 3.48e-01 88.8% 94.1%
4371295 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.52 42.0 3.01e-01 84.0% 36.9%
4856841 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.51 44.0 3.55e-01 89.3% 97.6%
2321077 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.51 42.0 3.52e-01 87.7% 53.7%
4180622 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.50 41.0 3.40e-01 85.6% 65.5%
4098598 5084.10.1.1 beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.50 41.0 2.89e-01 84.5% 41.1%
D2 high residues 244-349
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00691.26 best OmpA 46.3 6.70e-12 93.4% 90.8%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2aizP01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.87 82.0 8.14e-01 100.0% 100.0%
2lbtA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.86 82.0 7.53e-01 100.0% 84.0%
5m38C00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.86 82.0 7.96e-01 100.0% 96.5%
3cypB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.85 80.0 7.45e-01 100.0% 83.7%
5wtpA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.85 80.0 7.54e-01 100.0% 88.7%
3oonA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.84 73.0 7.14e-01 100.0% 85.8%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.83 79.0 7.24e-01 100.0% 90.8%
1r1mA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.83 78.0 6.99e-01 100.0% 92.9%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.82 76.0 6.70e-01 100.0% 76.5%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.81 75.0 6.53e-01 100.0% 72.6%
2zf8A02 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.80 60.0 6.40e-01 100.0% 90.2%
4b62A00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.79 73.0 6.59e-01 100.0% 79.0%
6aeoB01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.78 72.0 6.59e-01 100.0% 84.4%
1vm6A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.75 48.0 5.37e-01 84.9% 83.1%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.75 69.0 5.89e-01 100.0% 63.9%
4nq3A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.72 57.0 5.89e-01 100.0% 90.8%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.70 57.0 5.74e-01 100.0% 86.1%
6jw7A01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 53.0 4.40e-01 88.7% 64.9%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 58.0 5.15e-01 99.1% 94.6%
1cliB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.63 52.0 4.69e-01 100.0% 64.7%
5facA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.62 47.0 3.74e-01 81.1% 48.4%
3euwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.61 51.0 4.07e-01 90.6% 57.3%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 54.0 4.98e-01 100.0% 79.4%
3mcqA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.60 47.0 4.39e-01 100.0% 66.4%
1k77A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.60 47.0 3.57e-01 84.9% 45.6%
1p9lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 47.0 4.78e-01 85.8% 86.0%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.59 52.0 4.85e-01 100.0% 94.9%
1xg8A00 3.40.30.30 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Hypothetical protein sa0798. 0.57 43.0 4.32e-01 100.0% 77.8%
2g7zA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.57 51.0 4.96e-01 100.0% 95.8%
6ncrB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 51.0 3.95e-01 100.0% 62.2%
1nyrA03 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 49.0 3.60e-01 100.0% 43.7%
4jc0A03 3.30.750.200 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.56 44.0 4.26e-01 90.6% 74.2%
4a8jA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 39.0 2.86e-01 81.1% 27.4%
1f0iA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.56 50.0 3.98e-01 100.0% 78.5%
3fdjA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.55 49.0 4.68e-01 100.0% 96.1%
6vu9A02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 49.0 3.69e-01 100.0% 48.5%
3ewlB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 41.0 3.81e-01 100.0% 61.3%
5kztA03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.55 47.0 3.75e-01 95.3% 90.9%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 31.0 3.06e-01 100.0% 49.6%
2dj0A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 34.0 3.23e-01 100.0% 51.6%
2j6pA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.54 44.0 4.00e-01 89.6% 75.9%
2ywmA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 44.0 4.28e-01 89.6% 98.3%
2plcA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.53 41.0 3.08e-01 84.0% 58.4%
4lhpF00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.52 43.0 4.07e-01 90.6% 97.7%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 30.0 3.03e-01 100.0% 55.7%
2hlsA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 43.0 4.19e-01 94.3% 95.8%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4527021 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.92 85.0 8.22e-01 100.0% 87.8%
3385657 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 88.0 8.23e-01 100.0% 87.1%
4273645 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 7.84e-01 100.0% 79.7%
2773879 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 7.58e-01 100.0% 94.7%
3386470 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.90 86.0 8.20e-01 100.0% 89.2%
1347936 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 85.0 7.99e-01 100.0% 87.1%
4885799 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 86.0 8.06e-01 100.0% 91.1%
3973393 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 85.0 7.39e-01 100.0% 72.7%
3967481 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 85.0 7.37e-01 100.0% 72.7%
4167111 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 85.0 8.13e-01 100.0% 96.6%
3967490 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 8.20e-01 100.0% 93.0%
3962237 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.88 84.0 8.12e-01 100.0% 95.7%
3981506 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.87 82.0 7.01e-01 100.0% 68.8%
4482275 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.86 81.0 7.09e-01 100.0% 76.7%
3964336 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.86 81.0 7.05e-01 100.0% 73.3%
3948407 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.85 80.0 7.55e-01 100.0% 88.0%
None 0.85 80.0 7.54e-01 100.0% 88.7%
None 0.85 80.0 6.99e-01 100.0% 73.3%
4346934 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.85 79.0 7.67e-01 100.0% 90.4%
3386253 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 80.0 7.05e-01 100.0% 73.1%
140769 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 73.0 7.14e-01 100.0% 85.8%
4676587 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 79.0 7.45e-01 100.0% 89.4%
3973643 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.84 79.0 7.56e-01 100.0% 90.8%
3968879 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 78.0 6.79e-01 100.0% 71.6%
3976972 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.83 78.0 6.84e-01 100.0% 75.8%
216283 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.83 78.0 6.27e-01 100.0% 60.8%
3967361 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.83 78.0 7.46e-01 100.0% 89.9%
4007736 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.82 77.0 7.05e-01 100.0% 82.2%
2798263 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.82 77.0 6.78e-01 100.0% 73.8%
1347560 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.82 77.0 6.81e-01 100.0% 82.9%
1824325 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.82 77.0 6.93e-01 100.0% 84.9%
3979733 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.81 66.0 6.70e-01 100.0% 87.6%
4008652 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.81 76.0 6.27e-01 100.0% 64.6%
137312 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.81 75.0 6.51e-01 100.0% 73.1%
3387029 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.80 75.0 6.57e-01 100.0% 80.7%
4886896 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.79 64.0 6.15e-01 85.8% 75.6%
2798318 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.78 72.0 6.36e-01 100.0% 72.8%
4025756 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.67 53.0 4.67e-01 100.0% 57.4%
4059073 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.67 51.0 4.49e-01 100.0% 54.4%
5052553 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.65 50.0 4.61e-01 100.0% 62.1%
4971967 298.1.1.3 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth 0.64 47.0 4.81e-01 97.2% 79.0%
5035619 298.1.1.3 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth 0.64 49.0 4.93e-01 98.1% 81.9%
4944127 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.64 49.0 4.92e-01 87.7% 80.9%
4260262 298.1.1.9 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.63 51.0 5.19e-01 87.7% 87.6%
4946353 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.63 49.0 4.89e-01 87.7% 80.9%
5048033 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 51.0 4.36e-01 100.0% 56.1%
5042296 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.60 54.0 5.02e-01 99.1% 94.8%
5075893 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.60 51.0 5.05e-01 100.0% 90.0%
3821148 2002.1.2.2 a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › Glyco_hydro_18 0.59 45.0 4.04e-01 81.1% 80.0%
3833901 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 45.0 3.68e-01 81.1% 63.2%
5037062 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.58 49.0 3.50e-01 94.3% 69.0%
4951953 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 47.0 3.89e-01 88.7% 60.0%
3786335 2004.1.1.128 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB 0.58 42.0 3.05e-01 81.1% 27.6%
3184626 314.1.1.2 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.56 50.0 3.52e-01 100.0% 45.6%
4030540 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.56 47.0 3.33e-01 92.5% 69.3%
5040699 3008.1.1.0 a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.54 42.0 4.42e-01 94.3% 97.8%
4936327 7516.1.1.79 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 0.53 37.0 2.58e-01 71.7% 53.0%
1165491 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.53 45.0 3.41e-01 95.3% 47.8%
5054359 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.53 37.0 3.12e-01 72.6% 69.7%
4956272 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 44.0 4.32e-01 91.5% 97.4%
3962205 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 45.0 4.28e-01 100.0% 90.8%
4977505 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.52 43.0 4.26e-01 91.5% 97.4%
3417161 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 45.0 2.75e-01 99.1% 41.5%
3108975 315.1.1.1 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.51 42.0 4.13e-01 90.6% 93.9%
5071828 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 43.0 4.19e-01 91.5% 97.4%
4987550 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 43.0 4.26e-01 92.5% 98.2%
3478020 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.50 43.0 3.17e-01 94.3% 93.1%
5078921 4093.1.1.1 a+b three layers › CofE-like › CofE-like › CofE-like › F420_ligase 0.50 44.0 3.72e-01 100.0% 75.7%
3169441 2004.1.1.128 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB 0.50 43.0 3.12e-01 92.5% 62.5%
3972482 2485.1.1.127 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF7088 0.50 43.0 3.84e-01 94.3% 87.3%