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NC_062752.1__YP_010357317.1__M1M30_gp068__00068

Bact-Vir

NC_062752.1__YP_010357317.1__M1M30_gp068__00068

Identity

Accession:
NC_062752 ↗
Kingdom:
phage

Quality

67.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 402-511
PDB
D2 medium residues 46-241
PDB
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.60 21.0 3.61e-01 70.4% 98.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4891117 4038.1.1.11 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › SU10_portal 0.68 61.0 4.30e-01 94.9% 61.6%
4009028 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.52 23.0 2.85e-01 87.2% 63.3%
D3 medium residues 242-275_296-341
PDB
D4 medium residues 342-401
PDB
Domain cluster: representative