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NC_062752.1__YP_010357364.1__M1M30_gp115__00115

Bact-Vir

NC_062752.1__YP_010357364.1__M1M30_gp115__00115

Identity

Accession:
NC_062752 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Molycolviridae› Mollyvirus› Maribacter_phage_Colly_1

TaxID: 2745691

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-125
PDB
Domain cluster: rep: KT624200.1__AMM44889.1__SP15_090__00091__D1-123
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF12917.14 best YfbR-like 61.3 1.50e-16 96.0% 58.2%
PF13023.13 HD_3 26.1 1.00e-05 86.4% 38.8%
PF01966.29 HD 24.5 3.80e-05 65.6% 55.2%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tk8A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.81 74.0 6.32e-01 98.4% 63.4%
1xx7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.80 68.0 6.03e-01 97.6% 65.1%
1ynbA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.80 68.0 6.05e-01 100.0% 66.5%
2paqA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.78 71.0 6.24e-01 100.0% 67.8%
3mzoB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.76 70.0 5.80e-01 99.2% 59.0%
3kh1A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.71 66.0 5.59e-01 100.0% 63.6%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.67 59.0 4.34e-01 95.2% 41.2%
6oi7A01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.60 54.0 4.63e-01 97.6% 81.6%
3vkgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.51 44.0 4.10e-01 97.6% 73.8%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 33.0 3.51e-01 90.4% 73.4%
1n5uA05 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.51 38.0 3.98e-01 84.8% 86.6%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.51 40.0 2.86e-01 84.0% 87.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995646 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.85 74.0 6.41e-01 96.8% 63.3%
4976483 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.83 77.0 6.48e-01 97.6% 67.2%
5047096 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.82 76.0 6.31e-01 97.6% 60.0%
5024310 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.82 72.0 6.26e-01 98.4% 63.9%
4955962 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.82 71.0 6.35e-01 97.6% 67.5%
4990925 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.82 69.0 6.16e-01 96.8% 65.3%
1919141 131.1.1.9 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like 0.81 74.0 6.33e-01 98.4% 63.4%
4944097 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.81 76.0 6.25e-01 100.0% 65.2%
161426 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.81 69.0 6.06e-01 97.6% 64.2%
4039998 131.1.1.9 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like 0.81 76.0 6.40e-01 99.2% 65.6%
4993560 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.80 74.0 6.42e-01 98.4% 69.2%
5011113 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.80 68.0 6.01e-01 98.4% 64.0%
4961926 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.80 73.0 6.10e-01 100.0% 59.6%
5079110 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.80 74.0 6.29e-01 99.2% 64.7%
4011494 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.76 71.0 6.08e-01 100.0% 67.9%
2871227 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.64 57.0 5.03e-01 97.6% 85.8%
4030740 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.57 40.0 4.17e-01 86.4% 79.1%
3700655 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 47.0 4.33e-01 94.4% 73.9%
3306390 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.54 33.0 3.55e-01 100.0% 71.4%
4207229 1015.1.1.0 ↗ alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs 0.54 48.0 3.77e-01 97.6% 78.5%
D2 medium residues 126-191
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.94 68.0 7.21e-01 74.2% 83.1%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.92 68.0 6.31e-01 77.3% 88.7%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.89 66.0 6.74e-01 77.3% 90.5%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 78.0 5.45e-01 97.0% 89.5%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.86 63.0 4.48e-01 77.3% 29.3%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 74.0 6.92e-01 90.9% 91.0%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.86 80.0 6.90e-01 100.0% 91.8%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 62.0 5.81e-01 77.3% 64.9%
6f1eA01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.84 67.0 5.13e-01 84.8% 41.0%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.83 76.0 6.45e-01 100.0% 86.4%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.83 58.0 5.55e-01 72.7% 68.9%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 74.0 6.48e-01 98.5% 83.5%
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.81 74.0 5.06e-01 100.0% 50.7%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.80 73.0 6.25e-01 100.0% 82.4%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.79 62.0 6.58e-01 93.9% 96.5%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.79 72.0 5.71e-01 100.0% 92.1%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 57.0 4.84e-01 77.3% 87.6%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.78 67.0 5.79e-01 95.5% 84.3%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.77 70.0 5.75e-01 100.0% 67.8%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.76 54.0 5.52e-01 75.8% 81.5%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 57.0 5.25e-01 80.3% 62.7%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.76 68.0 4.82e-01 100.0% 75.9%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 65.0 5.22e-01 98.5% 69.9%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 69.0 5.21e-01 100.0% 46.0%
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.75 63.0 5.25e-01 98.5% 53.4%
8a0rA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.74 65.0 5.21e-01 98.5% 67.7%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 52.0 5.23e-01 75.8% 79.4%
2b3tB01 6.10.140.1980 Special › Helix non-globular › Helix Hairpins › 0.73 54.0 5.44e-01 81.8% 80.0%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.71 62.0 5.30e-01 98.5% 77.1%
3nrhA00 1.20.120.1550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 0.70 59.0 4.56e-01 97.0% 89.9%
2gsqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 59.0 5.15e-01 98.5% 77.8%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 52.0 5.07e-01 80.3% 72.6%
4g10A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 60.0 4.86e-01 100.0% 60.3%
3nkzA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.69 62.0 5.39e-01 97.0% 76.3%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.68 63.0 5.08e-01 100.0% 63.9%
2nxpB00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.68 56.0 4.48e-01 95.5% 45.5%
1yy7A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 58.0 5.09e-01 100.0% 74.3%
4hz4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 56.0 4.87e-01 98.5% 73.2%
2iw3B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 57.0 3.63e-01 95.5% 27.2%
3bqoA00 1.25.40.210 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain 0.67 55.0 3.93e-01 92.4% 33.2%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.67 47.0 4.80e-01 74.2% 79.4%
1g4uS01 1.20.120.260 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain 0.62 53.0 4.40e-01 100.0% 84.3%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.62 53.0 4.25e-01 98.5% 86.7%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.62 52.0 4.77e-01 97.0% 83.1%
3ehmA03 1.20.120.840 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain 0.61 50.0 4.12e-01 89.4% 100.0%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.60 50.0 4.13e-01 98.5% 69.9%
3l0iA01 1.20.120.1520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.59 49.0 3.65e-01 100.0% 35.2%
1q2lA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 47.0 3.29e-01 90.9% 52.2%
3d8lA00 1.10.8.940 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 0.57 49.0 4.43e-01 95.5% 94.5%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.57 48.0 3.53e-01 100.0% 77.0%
1y0kA00 3.40.1540.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein pa4535 › Protein of unknown function DUF1780, putative endonuclease 0.51 42.0 3.16e-01 100.0% 35.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4405928 5086.1.1.196 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YknX 0.96 71.0 7.01e-01 77.3% 75.7%
3297534 330.1.1.2 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 0.92 69.0 4.98e-01 78.8% 32.1%
3715996 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.91 66.0 7.64e-01 75.8% 100.0%
3811563 4207.1.2.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.91 70.0 5.46e-01 80.3% 45.6%
3927560 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.89 67.0 7.05e-01 78.8% 90.0%
3469530 3274.1.1.1 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.89 70.0 5.28e-01 81.8% 40.0%
4943086 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.89 65.0 6.38e-01 75.8% 72.9%
3838686 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.89 66.0 6.92e-01 77.3% 90.0%
3614667 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 68.0 4.16e-01 80.3% 39.4%
3349325 5086.1.1.135 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 0.88 65.0 6.07e-01 77.3% 66.3%
3786136 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.87 81.0 6.61e-01 100.0% 76.5%
3533309 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.87 81.0 6.80e-01 100.0% 84.8%
3476130 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.87 81.0 6.16e-01 100.0% 64.3%
3257392 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.86 80.0 5.83e-01 100.0% 50.3%
3498656 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.86 81.0 7.16e-01 100.0% 95.6%
3794795 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.86 80.0 6.85e-01 100.0% 90.0%
3583890 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.86 80.0 6.04e-01 100.0% 62.1%
3180530 3711.1.1.0 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.86 64.0 5.30e-01 78.8% 49.1%
3907206 603.1.1.124 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE, V-SNARE_C 0.85 79.0 5.61e-01 100.0% 48.3%
3187995 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.85 79.0 6.53e-01 100.0% 80.0%
3526861 603.1.1.99 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.85 77.0 6.42e-01 98.5% 76.4%
3595149 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.85 65.0 6.86e-01 80.3% 88.3%
4978688 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.84 77.0 6.77e-01 100.0% 86.3%
3837009 6157.1.1.7 ↗ alpha bundles › GKAP homology domain 1 › GKAP homology domain 1 › GKAP homology domain 1 › RPW8 0.84 64.0 5.51e-01 80.3% 61.0%
3731974 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.84 64.0 5.30e-01 80.3% 51.8%
4572664 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.84 72.0 7.05e-01 90.9% 94.3%
3541154 1078.1.1.6 ↗ extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › TMEM238 0.84 60.0 6.52e-01 75.8% 94.5%
3499836 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 77.0 5.70e-01 100.0% 74.8%
3750890 109.3.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.83 76.0 5.12e-01 100.0% 35.7%
3815026 604.1.1.148 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N 0.81 73.0 6.71e-01 100.0% 96.5%
4944283 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.81 73.0 5.66e-01 100.0% 73.6%
3711237 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.80 58.0 5.45e-01 77.3% 63.7%
3552989 604.8.1.1 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Smac_DIABLO 0.80 71.0 5.12e-01 100.0% 66.3%
3391706 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.78 71.0 5.52e-01 97.0% 74.6%
3678569 109.4.1.2687 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28645 0.77 58.0 3.76e-01 93.9% 18.6%
3227250 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.76 68.0 5.15e-01 100.0% 51.6%
4949854 601.18.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 0.76 66.0 5.57e-01 100.0% 71.7%
3463676 109.4.1.1186 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF6857 0.75 67.0 5.10e-01 100.0% 47.1%
4559832 3718.1.1.1 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT 0.75 63.0 5.50e-01 89.4% 72.6%
3699688 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.74 65.0 4.56e-01 100.0% 34.1%
3668286 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.74 62.0 6.10e-01 95.5% 92.9%
4978525 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.74 64.0 4.31e-01 100.0% 40.0%
3390932 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.72 64.0 5.77e-01 100.0% 81.1%
4942772 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.71 51.0 5.19e-01 77.3% 81.5%
5059047 109.4.1.207 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.70 55.0 3.34e-01 100.0% 12.5%
2703780 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.70 59.0 4.46e-01 100.0% 86.8%
3635384 611.3.1.0 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.68 61.0 5.33e-01 100.0% 86.0%
4992707 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 4.15e-01 92.4% 75.7%
3576468 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 52.0 4.69e-01 95.5% 84.2%
5069251 7602.1.1.1 ↗ a/b three-layered sandwiches › Lactate racemase C-terminal domain › Lactate racemase C-terminal domain › Lactate racemase C-terminal domain › LarA_C 0.60 51.0 3.59e-01 97.0% 31.8%