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NC_062752.1__YP_010357373.1__M1M30_gp124__00124

Bact-Vir

NC_062752.1__YP_010357373.1__M1M30_gp124__00124

Identity

Accession:
NC_062752 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-159
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04434.23 best SWIM 14.2 3.70e-02 32.4% 44.7%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xzmE02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 28.0 3.37e-01 79.3% 78.9%
5cenA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 27.0 3.40e-01 86.9% 89.7%
2nn6E00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.50 39.0 3.26e-01 83.4% 90.2%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185624 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.64 29.0 3.83e-01 75.9% 74.7%
5073791 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.54 32.0 3.98e-01 84.1% 93.3%