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YP_010357921.1
Arc-VirNC_062757__YP_010357921.1__M1M35-gp57__00057
Identity
- Accession:
- NC_062757 ↗
- Protein ID:
- YP_010357921.1 ↗
- Kingdom:
- archaea
Quality
66.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Pyrstoviridae›
Hatrivirus›
Haloarcula_tailed_virus_3
TaxID: 2877990
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-45
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w6kA01 | 6.20.120.20 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 38.0 | 3.74e-01 | 72.7% | 60.0% |
| 3hp0A00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 40.0 | 2.64e-01 | 81.8% | 40.4% |
| 3njdA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 39.0 | 2.52e-01 | 84.1% | 35.2% |
| 2igtA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 2.69e-01 | 88.6% | 33.1% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.53 | 37.0 | 2.80e-01 | 100.0% | 26.8% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 34.0 | 2.22e-01 | 72.7% | 67.8% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 2.67e-01 | 88.6% | 26.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3359734 | 148.1.1.54 ↗ | alpha arrays › Histone-like › Histone-related › Histone › DUF3456 | 0.58 | 40.0 | 3.48e-01 | 77.3% | 47.5% |
| 3500646 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.54 | 36.0 | 3.47e-01 | 95.5% | 56.0% |
| 4238837 | 376.1.2.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PET | 0.53 | 36.0 | 3.14e-01 | 75.0% | 47.8% |
| 3252725 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.51 | 39.0 | 3.24e-01 | 100.0% | 75.2% |
| 3743600 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.51 | 34.0 | 1.89e-01 | 100.0% | 4.1% |
| 3502809 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.50 | 34.0 | 3.34e-01 | 95.5% | 60.0% |