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NC_069742.1__YP_010597406.1__PM393_gp14__00014

Bact-Vir

NC_069742.1__YP_010597406.1__PM393_gp14__00014

Identity

Accession:
NC_069742 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Septimatrevirus› Pseudomonas_phage_vB_PaeS-Yazdi-M

TaxID: 2746928

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-122
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04466.20 best Terminase_3 23.5 5.20e-05 77.7% 32.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4103301 11.1.1.1248 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29240 0.54 27.0 3.04e-01 81.0% 57.8%
3581414 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 27.0 3.55e-01 76.9% 100.0%
D2 medium residues 134-213_305-349
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dkwA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.70 67.0 5.65e-01 100.0% 87.1%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 25.0 3.09e-01 72.8% 69.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185684 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.70 67.0 5.65e-01 100.0% 87.1%
2125479 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 66.0 5.54e-01 100.0% 85.7%
3964959 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 60.0 5.20e-01 100.0% 91.9%
4995715 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 58.0 4.54e-01 100.0% 92.9%
3295575 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.51 31.0 3.44e-01 84.0% 76.0%