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NC_069753.1__YP_010598056.1__PM407_gp35__00035
Bact-VirNC_069753.1__YP_010598056.1__PM407_gp35__00035
Identity
- Accession:
- NC_069753 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Taxonomy
TaxID: 3003632
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-15_124-166
Domain cluster:
rep: OL597555.1__UUB23321.1__X__00001__D16-68
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lsdF00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 58.0 | 4.86e-01 | 100.0% | 61.2% |
| 4go6B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 51.0 | 5.03e-01 | 87.7% | 100.0% |
| 3l5iA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 54.0 | 4.73e-01 | 94.7% | 65.9% |
| 2o8rB02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.61 | 48.0 | 3.58e-01 | 89.5% | 64.5% |
| 6fhvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.19e-01 | 100.0% | 74.5% |
| 3c30A02 | 2.20.20.100 | Mainly Beta › Single Sheet › Anthopleurin-A › LuxQ periplasmic domain, C-terminal subdomain | 0.57 | 37.0 | 3.60e-01 | 94.7% | 59.4% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 46.0 | 3.29e-01 | 98.2% | 78.3% |
| 7uwjC01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.54 | 44.0 | 3.53e-01 | 93.0% | 52.9% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.54 | 40.0 | 2.79e-01 | 80.7% | 57.6% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 43.0 | 3.41e-01 | 96.5% | 54.3% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 39.0 | 2.70e-01 | 84.2% | 94.2% |
| 4jb9H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.48e-01 | 98.2% | 71.8% |
| 5jpnB02 | 2.20.130.20 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › | 0.52 | 39.0 | 3.90e-01 | 86.0% | 91.4% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 2.95e-01 | 78.9% | 39.8% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 30.0 | 2.85e-01 | 70.2% | 44.4% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.51 | 38.0 | 2.73e-01 | 86.0% | 56.4% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3800776 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 63.0 | 4.14e-01 | 100.0% | 25.6% |
| 3508957 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.69 | 59.0 | 4.38e-01 | 94.7% | 48.3% |
| 5061698 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 59.0 | 4.98e-01 | 98.2% | 62.0% |
| 3419852 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.67 | 50.0 | 4.58e-01 | 82.5% | 70.9% |
| 3575334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 52.0 | 4.22e-01 | 86.0% | 66.4% |
| 4958520 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 48.0 | 3.92e-01 | 100.0% | 40.9% |
| 3772162 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 51.0 | 4.04e-01 | 87.7% | 40.0% |
| 1723265 | 11.39.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Minor structural protein 5 C-terminal Ig-like domain › Minor structural protein 5 C-terminal Ig-like domain › BppU-like_C | 0.65 | 52.0 | 4.52e-01 | 100.0% | 56.7% |
| 3578278 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 57.0 | 5.47e-01 | 100.0% | 87.7% |
| 3994697 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 56.0 | 5.53e-01 | 98.2% | 98.3% |
| 4857423 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 43.0 | 3.69e-01 | 70.2% | 47.9% |
| 3995155 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 43.0 | 3.80e-01 | 75.4% | 47.1% |
| 3916178 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 54.0 | 5.32e-01 | 98.2% | 93.3% |
| 3577168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.91e-01 | 93.0% | 100.0% |
| 3584079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 43.0 | 3.66e-01 | 75.4% | 83.2% |
| 3174139 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.61 | 50.0 | 3.13e-01 | 96.5% | 34.7% |
| 3576134 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.75e-01 | 82.5% | 98.0% |
| 3194003 | 1020.1.1.2 ↗ | extended segments › Ezh2 N-terminal domain › Ezh2 N-terminal domain › Ezh2 N-terminal domain › EZH2_N | 0.58 | 36.0 | 2.82e-01 | 93.0% | 26.9% |
| 3574662 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.11e-01 | 82.5% | 82.9% |
| 3195891 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.56 | 40.0 | 3.28e-01 | 75.4% | 64.8% |
| 1391879 | 11.1.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M | 0.56 | 42.0 | 3.76e-01 | 82.5% | 61.9% |
| 5051202 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 36.0 | 3.72e-01 | 94.7% | 69.1% |
| 3817650 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.55 | 46.0 | 3.89e-01 | 96.5% | 66.0% |
| 3598340 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 43.0 | 2.74e-01 | 96.5% | 31.3% |
| 3705135 | 101.17.1.3 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_1 | 0.54 | 41.0 | 3.64e-01 | 96.5% | 55.1% |
| 3641345 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.53 | 37.0 | 3.41e-01 | 75.4% | 70.0% |
| 3709246 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 43.0 | 4.25e-01 | 98.2% | 90.8% |
| 5034346 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.53 | 42.0 | 2.73e-01 | 98.2% | 25.9% |
| 4341425 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.52 | 36.0 | 2.46e-01 | 75.4% | 21.5% |
| 4135392 | 831.1.1.2 ↗ | a+b two layers › NSFL1 (p97 ATPase) cofactor p47, SEP domain › NSFL1 (p97 ATPase) cofactor p47, SEP domain › NSFL1 (p97 ATPase) cofactor p47, SEP domain › Spt20_SEP | 0.52 | 39.0 | 3.37e-01 | 91.2% | 97.3% |
| 4010956 | 5.1.4.332 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 | 0.51 | 39.0 | 2.42e-01 | 86.0% | 25.3% |
| 5069888 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.51 | 34.0 | 2.17e-01 | 94.7% | 12.2% |
| 3683817 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.50 | 38.0 | 2.47e-01 | 89.5% | 25.9% |
| 4876338 | 11.1.4.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 | 0.50 | 40.0 | 4.02e-01 | 98.2% | 91.9% |
D2
medium
residues 20-121
Domain cluster:
rep: NC_069754.1__YP_010598127.1__PM408_gp43__00043__D290-367