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NC_069755.1__YP_010598176.1__PM409_gp06__00006
Bact-VirNC_069755.1__YP_010598176.1__PM409_gp06__00006
Identity
- Accession:
- NC_069755 ↗
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Taxonomy
TaxID: 3003632
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31_45-75
D2
medium
residues 136-201
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 50.0 | 4.90e-01 | 84.8% | 70.3% |
| 3fdqA01 | 1.20.120.1030 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain | 0.60 | 42.0 | 3.56e-01 | 75.8% | 95.1% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.56 | 47.0 | 4.15e-01 | 92.4% | 79.6% |
| 1eepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 40.0 | 2.60e-01 | 84.8% | 35.0% |
| 5o3zL00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 35.0 | 2.38e-01 | 74.2% | 46.5% |
| 2cftA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 38.0 | 2.92e-01 | 84.8% | 72.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3621273 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.67 | 45.0 | 4.92e-01 | 74.2% | 83.6% |
| 3544253 | 101.1.1.70 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SANT_DAMP1_like | 0.66 | 48.0 | 4.51e-01 | 80.3% | 63.7% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 43.0 | 4.38e-01 | 72.7% | 69.2% |
| 3625015 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 50.0 | 4.88e-01 | 84.8% | 76.0% |
| 3243507 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.61 | 42.0 | 4.28e-01 | 74.2% | 72.3% |
| 3781047 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.61 | 42.0 | 4.43e-01 | 77.3% | 80.0% |
| 3967091 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.58 | 37.0 | 3.80e-01 | 72.7% | 68.3% |
| 3629477 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 42.0 | 4.37e-01 | 80.3% | 91.7% |
| 3301886 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.55 | 45.0 | 3.11e-01 | 92.4% | 64.8% |
| 3232718 | 108.1.1.156 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › ANIS5_cation-bd | 0.54 | 37.0 | 3.84e-01 | 71.2% | 88.3% |
| 3312326 | 109.59.1.15 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › TPR_PEP5_VPS11 | 0.51 | 42.0 | 3.45e-01 | 93.9% | 70.0% |
| 4289386 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.51 | 43.0 | 2.81e-01 | 97.0% | 25.8% |