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NC_070625.1__YP_010644408.1__PPK16_gp07__00007

Bact-Vir

NC_070625.1__YP_010644408.1__PPK16_gp07__00007

Identity

Accession:
NC_070625 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 70-155
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06810.18 best Phage_scaffold 88.1 9.30e-25 100.0% 49.4%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fdbA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 47.0 3.81e-01 73.3% 74.8%
3ungC01 3.30.70.2220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster 0.62 46.0 3.33e-01 79.1% 98.8%
6h9dA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.61 43.0 3.63e-01 76.7% 43.2%
3d0cB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 39.0 2.76e-01 83.7% 61.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4453591 3602.1.1.4 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › RRP36 0.68 49.0 4.21e-01 75.6% 51.9%
5066877 3633.1.1.4 alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › DUF1512 0.67 56.0 4.36e-01 90.7% 54.1%
3333117 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 49.0 4.53e-01 97.7% 62.9%