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NC_070625.1__YP_010644431.1__PPK16_gp30__00030

Bact-Vir

NC_070625.1__YP_010644431.1__PPK16_gp30__00030

Identity

Accession:
NC_070625 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-54
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.90 82.0 7.28e-01 100.0% 91.3%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 75.0 7.32e-01 100.0% 98.1%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 74.0 7.06e-01 100.0% 89.5%
1whmA01 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.80 72.0 6.36e-01 100.0% 98.6%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 69.0 6.64e-01 100.0% 83.9%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 68.0 5.97e-01 100.0% 64.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 69.0 6.12e-01 100.0% 69.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.78 69.0 5.90e-01 100.0% 62.3%
2k3yA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 5.14e-01 100.0% 76.5%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.15e-01 100.0% 80.0%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 4.90e-01 100.0% 39.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.75 59.0 4.65e-01 100.0% 42.2%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 6.24e-01 100.0% 84.5%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 67.0 4.88e-01 100.0% 60.0%
3hl8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.74 64.0 4.71e-01 100.0% 58.2%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.36e-01 100.0% 57.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.74 66.0 6.13e-01 100.0% 88.9%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 6.36e-01 100.0% 96.2%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.98e-01 100.0% 79.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.74e-01 100.0% 93.6%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.65e-01 100.0% 98.5%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.09e-01 100.0% 57.0%
3pqiA01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.68 53.0 4.54e-01 86.0% 100.0%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.89e-01 100.0% 78.7%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 4.87e-01 100.0% 96.7%
2lttA00 2.30.31.70 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.59 43.0 3.83e-01 80.0% 68.9%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 47.0 4.56e-01 100.0% 88.1%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 3.42e-01 80.0% 85.3%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 3.98e-01 94.0% 60.2%
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.54 41.0 3.22e-01 88.0% 59.8%
1reoA01 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.54 40.0 2.86e-01 84.0% 64.4%
1p5uB00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.54 38.0 2.86e-01 78.0% 83.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.23e-01 100.0% 84.5%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.64e-01 100.0% 76.9%
2kqfA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 40.0 3.43e-01 88.0% 76.0%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.54 46.0 3.98e-01 100.0% 66.3%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.36e-01 96.0% 81.0%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 42.0 3.80e-01 92.0% 86.5%
1p1dA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 39.0 3.37e-01 88.0% 78.7%
3s8kB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 42.0 3.05e-01 100.0% 90.1%
2q2eB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 41.0 2.77e-01 94.0% 68.8%
2dmzA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 37.0 3.23e-01 88.0% 80.9%
1qu6A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 38.0 3.44e-01 88.0% 72.4%
2db5A00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.50 36.0 2.92e-01 86.0% 55.5%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3408592 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 69.0 5.43e-01 100.0% 45.0%
3508441 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 73.0 5.79e-01 100.0% 50.5%
3868320 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.82 70.0 6.32e-01 100.0% 70.8%
598 4.1.1.68 beta barrels › SH3 › SH3 › SH3 › YorP 0.82 75.0 6.58e-01 100.0% 74.6%
3826746 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 5.97e-01 100.0% 58.7%
3487837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 74.0 4.81e-01 100.0% 30.5%
3342793 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.81 70.0 4.62e-01 100.0% 24.7%
3230520 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 70.0 5.66e-01 100.0% 52.2%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 73.0 6.90e-01 100.0% 83.3%
3935130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 69.0 6.72e-01 100.0% 85.5%
3514970 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 68.0 5.57e-01 100.0% 52.2%
3592540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 69.0 6.47e-01 100.0% 78.3%
3879755 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.80 73.0 5.61e-01 100.0% 62.9%
3500542 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 72.0 5.81e-01 100.0% 54.4%
3535268 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 68.0 5.44e-01 100.0% 49.5%
3449268 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.65e-01 100.0% 55.3%
3622137 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 68.0 5.54e-01 100.0% 52.2%
3349135 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 72.0 5.83e-01 100.0% 66.7%
3472726 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.78 71.0 5.23e-01 100.0% 40.0%
3684646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 5.70e-01 100.0% 58.7%
3467678 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.12e-01 100.0% 42.7%
3247995 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.78 68.0 5.99e-01 100.0% 67.1%
4025829 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 6.60e-01 100.0% 87.3%
3315471 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.77 70.0 5.79e-01 100.0% 60.0%
3317400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 4.71e-01 100.0% 33.6%
3508319 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 69.0 6.31e-01 100.0% 76.9%
3356591 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 66.0 5.26e-01 100.0% 49.5%
3591211 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 69.0 5.84e-01 100.0% 81.2%
3568329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 70.0 6.57e-01 100.0% 85.0%
3176049 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.76 69.0 6.16e-01 100.0% 72.5%
3472332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 63.0 6.17e-01 100.0% 83.6%
3503332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.12e-01 98.0% 98.5%
3957249 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 6.13e-01 98.0% 83.6%
3302166 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 68.0 6.23e-01 100.0% 81.5%
3926207 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 68.0 6.67e-01 100.0% 94.3%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 65.0 5.85e-01 100.0% 87.1%
3659671 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.74 68.0 6.03e-01 100.0% 81.4%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 69.0 6.25e-01 100.0% 86.2%
567 4.1.1.48 beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.74 65.0 6.25e-01 100.0% 86.0%
3824699 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 68.0 6.16e-01 100.0% 81.5%
3784140 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 68.0 6.56e-01 100.0% 92.7%
3514345 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 64.0 5.93e-01 100.0% 95.4%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 67.0 5.89e-01 100.0% 71.4%
3769507 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.71 63.0 5.58e-01 100.0% 70.0%
2127246 4.8.1.4 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT 0.71 62.0 5.62e-01 100.0% 73.9%
3557677 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.57e-01 100.0% 87.1%
3914833 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 61.0 5.54e-01 100.0% 80.0%
3725153 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.70 62.0 5.29e-01 100.0% 62.5%
4134531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 5.41e-01 100.0% 66.2%
3238955 4.1.1.377 beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.69 60.0 5.16e-01 100.0% 68.8%
5073863 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.68 60.0 5.53e-01 100.0% 87.7%
3758536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.13e-01 100.0% 77.1%
3926430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 58.0 5.48e-01 100.0% 86.7%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.64 54.0 5.05e-01 100.0% 86.2%
4017600 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 52.0 3.16e-01 96.0% 26.8%
5058457 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 52.0 4.85e-01 100.0% 75.4%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 52.0 4.75e-01 100.0% 70.0%
3501312 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.67e-01 100.0% 86.2%
3643001 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 49.0 3.94e-01 100.0% 73.3%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.72e-01 100.0% 86.2%
4360830 5.1.3.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.60 48.0 2.85e-01 92.0% 22.1%
4243071 3699.1.1.0 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain 0.56 46.0 4.50e-01 96.0% 89.1%
3475657 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.54 40.0 3.35e-01 86.0% 72.0%
3397694 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 43.0 2.85e-01 92.0% 32.3%
3478549 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.53 39.0 3.24e-01 88.0% 64.5%
3607724 220.1.1.92 beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.53 45.0 3.38e-01 100.0% 69.2%
D2 high residues 61-109
PDB
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 6.05e-01 100.0% 94.9%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 6.26e-01 100.0% 98.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 62.0 5.74e-01 100.0% 92.2%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 6.04e-01 100.0% 94.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 61.0 5.84e-01 100.0% 98.3%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.75e-01 100.0% 90.3%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 61.0 5.71e-01 100.0% 93.4%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 5.60e-01 100.0% 83.1%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 5.83e-01 100.0% 96.6%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.19e-01 100.0% 67.5%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 5.85e-01 100.0% 94.7%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 5.76e-01 100.0% 90.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.38e-01 100.0% 80.0%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 60.0 4.82e-01 100.0% 75.0%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.60e-01 100.0% 91.7%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.61e-01 100.0% 91.5%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.23e-01 100.0% 71.1%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 4.92e-01 100.0% 56.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.33e-01 100.0% 79.4%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 57.0 4.05e-01 100.0% 83.2%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 56.0 5.35e-01 93.9% 100.0%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 58.0 4.31e-01 100.0% 70.2%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 54.0 4.82e-01 98.0% 74.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 4.81e-01 100.0% 57.0%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 57.0 4.39e-01 100.0% 72.4%
2d3jA00 2.60.40.2170 Mainly Beta › Sandwich › Immunoglobulin-like › Wnt, WIF domain 0.65 49.0 3.48e-01 83.7% 87.3%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 4.59e-01 100.0% 66.3%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.22e-01 100.0% 75.0%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 54.0 4.18e-01 100.0% 79.5%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.64e-01 100.0% 73.0%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.40e-01 100.0% 57.0%
4czxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 50.0 3.08e-01 93.9% 21.6%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.42e-01 100.0% 64.4%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.49e-01 98.0% 80.0%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 48.0 2.93e-01 93.9% 43.6%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.61 49.0 3.86e-01 93.9% 62.7%
1lmlA04 2.30.34.10 Mainly Beta › Roll › Leishmanolysin; domain 4 › Leishmanolysin domain 4 0.60 51.0 4.16e-01 100.0% 73.7%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 48.0 3.33e-01 91.8% 71.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.59e-01 100.0% 84.9%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.00e-01 100.0% 65.7%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 49.0 3.53e-01 100.0% 34.1%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.10e-01 100.0% 56.2%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 47.0 3.44e-01 91.8% 73.4%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 43.0 2.91e-01 85.7% 28.4%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.58 50.0 3.89e-01 100.0% 68.8%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.24e-01 100.0% 74.3%
2hh8A00 3.30.1810.10 Alpha Beta › 2-Layer Sandwich › YdfO-like fold › YdfO-like 0.57 45.0 3.45e-01 91.8% 72.4%
6jkuA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.57 46.0 3.72e-01 91.8% 83.7%
2fp8B00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 48.0 2.95e-01 98.0% 19.5%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.30e-01 100.0% 85.5%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 39.0 3.49e-01 75.5% 54.1%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 48.0 3.93e-01 100.0% 56.4%
3f3fD01 2.20.25.500 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 38.0 3.86e-01 77.6% 90.2%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.54e-01 100.0% 82.9%
2ymuA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 2.92e-01 100.0% 96.4%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.74e-01 95.9% 21.0%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.53 42.0 4.18e-01 100.0% 96.1%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 41.0 2.66e-01 100.0% 84.4%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.52 36.0 3.32e-01 77.6% 53.6%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 40.0 2.51e-01 93.9% 27.5%
3vskA01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.51 36.0 2.74e-01 77.6% 53.4%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 43.0 3.04e-01 100.0% 77.3%
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 38.0 2.94e-01 85.7% 70.5%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.51 36.0 2.57e-01 81.6% 37.2%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.50 43.0 3.72e-01 100.0% 62.0%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
279006 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 67.0 5.97e-01 100.0% 82.6%
3214234 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.27e-01 100.0% 93.3%
3759402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.99e-01 100.0% 89.2%
3789233 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 65.0 5.93e-01 100.0% 86.2%
3918340 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 65.0 5.80e-01 100.0% 81.4%
3723808 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 65.0 5.91e-01 100.0% 89.2%
5022448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.52e-01 100.0% 85.3%
3231704 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 62.0 5.70e-01 98.0% 84.6%
3233511 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 63.0 6.06e-01 98.0% 100.0%
3535424 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 63.0 5.60e-01 100.0% 80.0%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 62.0 5.83e-01 100.0% 93.3%
3203654 601.16.1.12 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1 0.71 63.0 4.15e-01 100.0% 30.5%
3188199 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.32e-01 100.0% 70.0%
3254502 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 62.0 5.00e-01 100.0% 64.2%
3218889 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 4.69e-01 100.0% 47.1%
3547089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 59.0 4.89e-01 100.0% 52.2%
3695780 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.28e-01 100.0% 70.0%
4012096 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 4.77e-01 100.0% 50.9%
3546762 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 62.0 5.51e-01 100.0% 80.0%
3503771 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.63e-01 100.0% 86.2%
3416133 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.36e-01 100.0% 74.7%
3275832 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.70 58.0 5.68e-01 100.0% 92.7%
3625911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.61e-01 100.0% 86.2%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.31e-01 100.0% 74.7%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.70 60.0 4.14e-01 100.0% 29.1%
167151 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 60.0 5.74e-01 100.0% 98.2%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.70 59.0 4.62e-01 100.0% 44.3%
3347851 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 54.0 4.87e-01 100.0% 61.4%
3535437 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.68e-01 100.0% 90.0%
3234947 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 59.0 5.48e-01 100.0% 86.2%
3774821 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.41e-01 100.0% 85.0%
3479384 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 58.0 3.90e-01 100.0% 47.1%
3554105 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 58.0 4.30e-01 100.0% 68.1%
3712932 220.1.1.263 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_29 0.67 59.0 4.14e-01 100.0% 48.4%
3374228 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.36e-01 100.0% 91.7%
3348231 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.06e-01 100.0% 80.0%
3781209 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.67 56.0 4.56e-01 100.0% 52.0%
3435006 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.67 56.0 5.18e-01 100.0% 86.2%
3751478 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.66 57.0 5.03e-01 100.0% 86.7%
3782145 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.66 57.0 4.64e-01 100.0% 78.9%
3783160 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.66 56.0 5.18e-01 100.0% 83.1%
3881121 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 53.0 4.33e-01 100.0% 47.0%
3592788 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 4.28e-01 100.0% 71.7%
3515495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.35e-01 100.0% 49.5%
3478678 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 4.88e-01 100.0% 90.7%
3734395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.11e-01 100.0% 85.7%
3722745 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.65 55.0 4.77e-01 100.0% 85.0%
3259583 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.65 55.0 4.77e-01 100.0% 83.7%
3826751 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 54.0 4.71e-01 100.0% 72.5%
3935130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.04e-01 100.0% 85.5%
3743741 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.64 54.0 4.62e-01 100.0% 76.5%
3480822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 52.0 5.22e-01 100.0% 94.0%
3622389 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 4.77e-01 100.0% 70.8%
3933763 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 52.0 4.69e-01 100.0% 65.3%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 50.0 4.71e-01 100.0% 70.8%
3359784 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 49.0 4.60e-01 100.0% 69.2%
3510676 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.23e-01 100.0% 49.5%
3828657 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.37e-01 100.0% 83.0%
3516333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.80e-01 100.0% 80.0%
153172 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 50.0 4.30e-01 100.0% 52.2%
4003717 4.1.1.50 beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.63 52.0 4.67e-01 100.0% 73.3%
3436556 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.63 52.0 4.68e-01 100.0% 88.0%
3313119 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 49.0 4.29e-01 100.0% 56.2%
3622137 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 50.0 4.26e-01 100.0% 52.2%
3931993 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.69e-01 100.0% 76.7%
3797642 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 49.0 3.47e-01 100.0% 24.9%
3970340 2.7.1.4 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › DUF6484 0.62 42.0 3.21e-01 71.4% 48.8%
3472332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.70e-01 100.0% 81.8%
3287340 234.3.1.1 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain › Colicin_D 0.62 52.0 4.24e-01 100.0% 49.5%
3199835 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.65e-01 100.0% 85.3%
3571064 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 48.0 4.23e-01 100.0% 55.3%
3535268 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 48.0 4.10e-01 100.0% 49.5%
3511551 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.80e-01 100.0% 86.7%
3924149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.73e-01 100.0% 92.0%
3494671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.62e-01 81.6% 88.9%
3936726 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.89e-01 100.0% 89.1%
3457163 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 50.0 4.41e-01 100.0% 65.0%
3929260 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.73e-01 100.0% 89.1%
3628131 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 48.0 4.03e-01 100.0% 48.0%
3395948 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.60 47.0 4.67e-01 100.0% 85.5%
5021355 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.60 48.0 3.48e-01 91.8% 77.0%
3496659 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.55e-01 100.0% 78.3%
3868320 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.60 45.0 4.31e-01 100.0% 69.2%
5047862 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.60 48.0 3.48e-01 91.8% 77.0%
3800251 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 4.20e-01 91.8% 77.3%
3397846 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.44e-01 100.0% 80.0%
4474202 809.1.1.7 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF6392 0.60 46.0 3.94e-01 89.8% 52.6%
3638396 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.60 49.0 4.67e-01 100.0% 88.3%
3502290 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.51e-01 100.0% 80.0%
3449268 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.16e-01 100.0% 57.6%
3502388 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.19e-01 100.0% 64.0%
3243256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 3.43e-01 100.0% 28.0%
3941320 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.57 46.0 4.16e-01 100.0% 65.3%
4972400 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 44.0 4.52e-01 91.8% 97.8%
3405436 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.50e-01 100.0% 73.0%