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NC_070763.1__YP_010648937.1__PP303_gp057__00057
Bact-VirNC_070763.1__YP_010648937.1__PP303_gp057__00057
Identity
- Accession:
- NC_070763 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
TaxID: 2571247
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-40
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t3dA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 1.00 | 93.0 | 5.86e-01 | 100.0% | 24.3% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.94 | 84.0 | 6.48e-01 | 100.0% | 47.9% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.93 | 81.0 | 6.46e-01 | 100.0% | 51.5% |
| 1iipA02 | 1.10.150.160 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.91 | 80.0 | 5.89e-01 | 100.0% | 40.0% |
| 4houB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.91 | 79.0 | 4.69e-01 | 100.0% | 14.0% |
| 3dzaA02 | 6.10.250.2140 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.89 | 74.0 | 6.06e-01 | 94.1% | 51.6% |
| 2xz2A00 | 1.20.960.50 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › Cleavage stimulation factor subunit 1, dimerisation domain | 0.89 | 74.0 | 5.92e-01 | 94.1% | 48.5% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 75.0 | 6.29e-01 | 100.0% | 55.9% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.88 | 76.0 | 4.93e-01 | 100.0% | 23.1% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.88 | 75.0 | 6.84e-01 | 100.0% | 72.3% |
| 4lzgA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.87 | 74.0 | 5.44e-01 | 100.0% | 36.6% |
| 1ug7A00 | 1.20.120.360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Axin interactor, dorsalization-associated protein, N-terminal domain | 0.86 | 72.0 | 4.89e-01 | 100.0% | 26.6% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 73.0 | 4.80e-01 | 100.0% | 24.1% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.86 | 71.0 | 6.35e-01 | 100.0% | 65.4% |
| 1ca1A01 | 1.10.575.10 | Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease | 0.85 | 70.0 | 4.15e-01 | 100.0% | 13.2% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.85 | 72.0 | 6.28e-01 | 100.0% | 64.2% |
| 4gyoB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 71.0 | 4.73e-01 | 100.0% | 24.5% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.84 | 68.0 | 6.00e-01 | 97.1% | 64.2% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 71.0 | 5.11e-01 | 100.0% | 33.7% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 71.0 | 4.88e-01 | 100.0% | 28.6% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.82 | 68.0 | 5.34e-01 | 100.0% | 44.2% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 64.0 | 6.37e-01 | 100.0% | 91.9% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 66.0 | 5.40e-01 | 100.0% | 48.5% |
| 3ziuA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 62.0 | 3.82e-01 | 100.0% | 14.5% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.77 | 63.0 | 4.31e-01 | 100.0% | 27.1% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.75 | 62.0 | 4.33e-01 | 100.0% | 28.8% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 54.0 | 4.46e-01 | 100.0% | 44.1% |
| 1o9gA02 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 54.0 | 5.15e-01 | 100.0% | 79.1% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 56.0 | 4.44e-01 | 100.0% | 48.1% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.65 | 55.0 | 3.86e-01 | 100.0% | 37.1% |
| 5hiwA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 49.0 | 2.80e-01 | 97.1% | 28.1% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 47.0 | 4.58e-01 | 100.0% | 82.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003284 | 3579.1.1.0 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J | 0.98 | 90.0 | 5.58e-01 | 100.0% | 21.3% |
| 5030066 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.97 | 88.0 | 5.34e-01 | 97.1% | 19.4% |
| 4326325 | 3579.1.1.6 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › MbhD+MbhE | 0.97 | 87.0 | 5.28e-01 | 100.0% | 17.9% |
| 5012498 | 3843.1.1.28 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MbhD | 0.96 | 87.0 | 6.85e-01 | 100.0% | 52.3% |
| 3360337 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.92 | 82.0 | 7.81e-01 | 100.0% | 85.0% |
| 4630477 | 632.18.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › EzrA | 0.91 | 80.0 | 6.79e-01 | 100.0% | 61.8% |
| 5060146 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.90 | 79.0 | 6.35e-01 | 100.0% | 52.3% |
| 5060559 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.89 | 78.0 | 6.48e-01 | 100.0% | 56.7% |
| 3670473 | 220.1.1.227 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3119 | 0.87 | 74.0 | 4.83e-01 | 100.0% | 23.6% |
| 1405082 | 4.21.1.1 ↗ | beta barrels › SH3 › ImpE-like › ImpE-like › ImpE | 0.86 | 75.0 | 4.72e-01 | 100.0% | 19.8% |
| 3267006 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.86 | 72.0 | 4.60e-01 | 94.1% | 20.9% |
| 4063607 | 192.17.1.11 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › UVR | 0.86 | 72.0 | 6.95e-01 | 100.0% | 85.0% |
| 4071066 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.86 | 73.0 | 6.50e-01 | 100.0% | 68.0% |
| 3387163 | 3801.1.1.0 ↗ | extended segments › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) | 0.85 | 72.0 | 7.18e-01 | 97.1% | 94.3% |