←Back to structures
NC_070763.1__YP_010649034.1__PP303_gp142__00154
Bact-VirNC_070763.1__YP_010649034.1__PP303_gp142__00154
Identity
- Accession:
- NC_070763 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
TaxID: 2571247
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-80
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 27.0 | 3.56e-01 | 79.7% | 86.1% |
| 1kaxA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.58 | 31.0 | 3.55e-01 | 82.3% | 70.9% |
| 1tk7A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.57 | 23.0 | 3.21e-01 | 100.0% | 75.7% |
| 1cw1A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.54 | 39.0 | 2.50e-01 | 77.2% | 15.9% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 30.0 | 3.35e-01 | 96.2% | 71.9% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 30.0 | 3.53e-01 | 79.7% | 87.5% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 30.0 | 3.65e-01 | 78.5% | 100.0% |
| 1qxmA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 42.0 | 3.52e-01 | 89.9% | 95.2% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.42e-01 | 78.5% | 79.3% |
| 1y2mD01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 41.0 | 3.13e-01 | 94.9% | 82.7% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 30.0 | 3.39e-01 | 82.3% | 89.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027092 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 43.0 | 3.89e-01 | 78.5% | 86.4% |
| 5029687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 26.0 | 3.21e-01 | 82.3% | 71.1% |
| 3519325 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 34.0 | 3.93e-01 | 86.1% | 100.0% |
| 3926962 | 3964.1.1.1 ↗ | beta meanders › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE | 0.54 | 31.0 | 3.17e-01 | 83.5% | 56.2% |
| 3937384 | 3964.1.1.1 ↗ | beta meanders › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE | 0.54 | 31.0 | 3.20e-01 | 100.0% | 58.7% |
| 3258610 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.82e-01 | 87.3% | 78.8% |
| 3781329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 32.0 | 3.25e-01 | 83.5% | 63.7% |