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NC_070764.1__YP_010649100.1__PP304_gp056__00056

Bact-Vir

NC_070764.1__YP_010649100.1__PP304_gp056__00056

Identity

Accession:
NC_070764 ↗
Kingdom:
phage

Quality

69.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Godonkavirus› Gordonia_phage_Phendrix

TaxID: 2593335

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-63
PDB
Domain cluster: rep: OR521085.1__WNO28375.1__SEA_PSONYX_67__00067__D47-100
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.82 65.0 5.87e-01 84.6% 100.0%
4lizA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.72 62.0 4.51e-01 96.2% 44.2%
2jveA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.71 61.0 5.48e-01 96.2% 90.1%
8gk4C02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.68 51.0 4.37e-01 86.5% 100.0%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 53.0 4.60e-01 84.6% 92.6%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.68 55.0 4.07e-01 94.2% 44.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.67 56.0 4.03e-01 100.0% 49.1%
4wgkA02 2.60.40.2300 Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain 0.66 58.0 4.34e-01 100.0% 59.4%
1x67A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.66 55.0 4.15e-01 96.2% 42.9%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.65 52.0 5.01e-01 94.2% 85.7%
2h6uA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.64 54.0 4.28e-01 98.1% 48.2%
1i1gA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.64 51.0 4.63e-01 94.2% 97.4%
1wfuA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 54.0 4.50e-01 100.0% 52.6%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 51.0 4.48e-01 94.2% 96.4%
4dixA01 2.60.40.2700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 49.0 4.22e-01 98.1% 52.9%
4gxbA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 50.0 4.23e-01 100.0% 49.5%
2qv6A01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.63 53.0 4.12e-01 100.0% 71.9%
2hw4A01 3.50.20.20 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus 0.63 52.0 4.17e-01 96.2% 85.5%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.62 45.0 2.92e-01 78.8% 54.3%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 48.0 4.21e-01 96.2% 57.6%
4d7pA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.61 52.0 4.34e-01 100.0% 58.3%
1cfyA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.61 50.0 3.83e-01 96.2% 46.6%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.28e-01 100.0% 55.1%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.34e-01 98.1% 66.0%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.23e-01 100.0% 53.9%
2pttB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 50.0 4.13e-01 100.0% 63.9%
7y6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.31e-01 100.0% 56.7%
3o2sB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 50.0 3.86e-01 100.0% 47.8%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.60 47.0 4.54e-01 96.2% 78.8%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 48.0 4.20e-01 96.2% 96.6%
2aehA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 49.0 4.15e-01 100.0% 52.1%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.60 49.0 3.73e-01 98.1% 83.1%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.60 49.0 3.96e-01 100.0% 50.4%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.59 49.0 4.31e-01 98.1% 96.4%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 3.73e-01 100.0% 58.3%
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 3.99e-01 100.0% 47.2%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.59 43.0 2.82e-01 80.8% 55.1%
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.59 49.0 3.34e-01 100.0% 27.5%
1t6eX01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.58 50.0 3.46e-01 96.2% 100.0%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.66e-01 100.0% 74.1%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 3.51e-01 96.2% 38.5%
2z5bA00 3.30.230.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.58 45.0 3.44e-01 86.5% 64.6%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 46.0 4.11e-01 98.1% 97.6%
4x83A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 3.98e-01 100.0% 52.9%
7neaA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.57 39.0 3.11e-01 75.0% 85.1%
6lnhB01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.56 42.0 2.93e-01 100.0% 20.8%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 44.0 3.99e-01 96.2% 97.6%
2z5bB01 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 41.0 3.20e-01 78.8% 47.9%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 3.96e-01 98.1% 94.7%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 40.0 3.59e-01 100.0% 53.0%
6kwzA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.55 44.0 3.71e-01 96.2% 73.5%
5xbfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 44.0 3.82e-01 96.2% 56.3%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.54 46.0 3.29e-01 98.1% 77.9%
1nepA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 3.52e-01 100.0% 48.5%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 3.17e-01 96.2% 30.3%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 44.0 3.20e-01 100.0% 38.5%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.53e-01 100.0% 76.6%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.62e-01 100.0% 61.4%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 45.0 3.63e-01 100.0% 63.3%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 3.45e-01 100.0% 64.7%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 40.0 3.51e-01 94.2% 64.6%
7eehA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 42.0 2.79e-01 96.2% 33.7%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.52 42.0 3.09e-01 90.4% 49.3%
2ypjA00 2.60.120.1070 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.36e-01 98.1% 48.4%
4dyoA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.50 39.0 3.12e-01 100.0% 75.5%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010552 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 74.0 5.51e-01 100.0% 99.2%
3963926 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.77 68.0 5.87e-01 98.1% 98.7%
4943094 304.1.1.1 ↗ a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C 0.74 64.0 4.66e-01 98.1% 95.9%
3760983 3335.1.1.3 ↗ beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C 0.70 56.0 4.59e-01 90.4% 100.0%
4030365 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.69 53.0 4.26e-01 100.0% 42.9%
4975793 224.1.1.1 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.68 57.0 4.32e-01 96.2% 45.4%
3582833 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.67 56.0 4.47e-01 98.1% 50.0%
146929 3115.3.1.1 ↗ a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 0.66 53.0 5.27e-01 98.1% 87.5%
3651007 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.65 45.0 2.54e-01 73.1% 7.3%
3842874 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.65 56.0 4.52e-01 100.0% 51.4%
3700526 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 56.0 4.45e-01 100.0% 51.8%
4964337 3115.5.1.1 ↗ a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB 0.65 54.0 5.33e-01 96.2% 96.4%
3235704 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.64 56.0 4.81e-01 100.0% 90.5%
4021064 10.9.1.0 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin 0.64 56.0 4.51e-01 100.0% 72.4%
3646564 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.63 48.0 2.73e-01 82.7% 51.3%
3657071 109.4.1.2208 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 0.63 47.0 2.79e-01 80.8% 71.6%
3462080 109.4.1.1383 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.63 46.0 2.71e-01 76.9% 11.7%
5080205 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.63 51.0 5.22e-01 94.2% 98.0%
3897763 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.15e-01 94.2% 60.9%
3427946 109.4.1.1521 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif 0.62 48.0 2.74e-01 84.6% 50.1%
3333061 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.62 45.0 2.53e-01 76.9% 12.3%
3618720 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 50.0 4.19e-01 98.1% 50.5%
3336604 109.4.1.1383 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.62 46.0 2.56e-01 78.8% 7.5%
4018427 10.9.1.0 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin 0.62 54.0 4.47e-01 100.0% 73.7%
3296178 109.4.1.1476 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif 0.62 46.0 2.53e-01 80.8% 38.6%
3928042 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.30e-01 100.0% 60.0%
5044440 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.61 53.0 4.01e-01 96.2% 45.6%
3444049 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.61 47.0 2.68e-01 84.6% 53.8%
3830691 109.4.1.2337 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 0.61 47.0 2.68e-01 84.6% 54.1%
3645596 109.4.1.1476 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif 0.60 42.0 2.44e-01 75.0% 8.1%
3379402 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.60 45.0 2.54e-01 80.8% 7.4%
2028252 3986.2.1.1 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd 0.60 48.0 4.62e-01 94.2% 79.7%
4010500 7503.1.1.24 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF25851 0.60 42.0 3.15e-01 100.0% 26.6%
3349809 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.59 45.0 2.55e-01 78.8% 8.5%
3940192 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.59 42.0 3.58e-01 100.0% 45.5%
4927977 3662.1.1.0 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.58 42.0 3.35e-01 76.9% 43.6%
4146398 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.58 42.0 3.05e-01 80.8% 27.1%
4058527 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.58 48.0 4.12e-01 100.0% 69.5%
3935925 10.12.1.101 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.58 43.0 2.63e-01 82.7% 55.4%
3415432 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 46.0 3.62e-01 100.0% 54.8%
5051138 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 49.0 3.46e-01 100.0% 38.9%
3234045 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.56 47.0 3.71e-01 100.0% 93.3%
3748734 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.56 46.0 3.61e-01 100.0% 56.9%
4017868 10.12.1.52 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 0.56 45.0 2.85e-01 94.2% 17.0%
4955225 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.56 46.0 3.05e-01 100.0% 39.6%
4160542 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.56 42.0 4.15e-01 88.5% 86.2%
2764339 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.56 38.0 3.03e-01 75.0% 80.5%
4971633 4176.1.1.2 ↗ a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N 0.56 45.0 3.09e-01 98.1% 23.1%
3250180 223.3.1.6 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.56 41.0 2.95e-01 80.8% 33.5%
3455769 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 48.0 3.79e-01 98.1% 80.0%
4471927 6016.1.1.1 ↗ a+b two layers › Domain 1 of outer membrane lipoprotein Wza › Domain 1 of outer membrane lipoprotein Wza › Domain 1 of outer membrane lipoprotein Wza › Poly_export 0.55 43.0 3.86e-01 98.1% 92.9%
3302114 109.4.1.619 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DYW_deaminase 0.55 46.0 3.52e-01 98.1% 68.1%
3349820 1.1.7.101 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ubiquitin_UBP8 0.55 44.0 3.86e-01 90.4% 100.0%
4867320 221.1.1.66 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PIK3CG_ABD 0.54 45.0 3.72e-01 100.0% 50.0%
3935404 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.54 44.0 3.81e-01 96.2% 55.6%
3235407 11.2.1.52 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.54 47.0 3.46e-01 100.0% 42.8%
3789093 3519.1.1.1 ↗ beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Pex24p 0.54 47.0 3.88e-01 100.0% 89.0%
3665459 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.54 41.0 3.67e-01 94.2% 57.3%
3706447 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 46.0 3.49e-01 94.2% 40.8%
4013514 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.53 40.0 3.39e-01 92.3% 49.5%
4942338 815.1.1.1 ↗ a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 0.52 41.0 3.48e-01 98.1% 50.0%
3551231 221.1.1.87 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N_2 0.51 40.0 3.34e-01 94.2% 74.3%
4007508 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.51 38.0 3.84e-01 96.2% 92.0%
161571 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.51 38.0 2.49e-01 92.3% 84.5%
3216210 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.50 38.0 3.87e-01 94.2% 98.0%
3958897 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.50 39.0 3.24e-01 98.1% 69.2%
4648475 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.50 39.0 3.86e-01 96.2% 93.3%
4629547 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.50 40.0 2.97e-01 98.1% 95.2%