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NC_070774.1__YP_010649817.1__PP411_gp07__00007
Bact-VirNC_070774.1__YP_010649817.1__PP411_gp07__00007
Identity
- Accession:
- NC_070774 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Taxonomy
TaxID: 2799672
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22479.3 best | Pam3_gp18 | 35.9 | 1.20e-08 | 100.0% | 56.4% |
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.78 | 58.0 | 5.78e-01 | 78.9% | 94.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.78 | 54.0 | 4.76e-01 | 75.4% | 50.0% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.75 | 54.0 | 4.15e-01 | 75.4% | 86.9% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.74 | 54.0 | 4.02e-01 | 77.2% | 37.1% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 65.0 | 4.38e-01 | 96.5% | 58.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 52.0 | 4.60e-01 | 75.4% | 54.3% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.72 | 60.0 | 5.17e-01 | 93.0% | 61.1% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 62.0 | 4.21e-01 | 96.5% | 58.0% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 60.0 | 4.52e-01 | 93.0% | 52.6% |
| 3ecqA01 | 2.60.120.870 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 58.0 | 4.09e-01 | 93.0% | 61.7% |
| 3auxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 3.83e-01 | 100.0% | 32.5% |
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.70 | 58.0 | 4.90e-01 | 89.5% | 74.7% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.70 | 53.0 | 5.28e-01 | 82.5% | 88.3% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 58.0 | 4.43e-01 | 93.0% | 52.6% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.69 | 52.0 | 4.38e-01 | 84.2% | 67.6% |
| 6jptA00 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.69 | 52.0 | 4.13e-01 | 82.5% | 62.0% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.68 | 57.0 | 3.77e-01 | 91.2% | 64.3% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 48.0 | 4.51e-01 | 75.4% | 60.6% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.68 | 50.0 | 4.35e-01 | 80.7% | 86.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 49.0 | 4.44e-01 | 75.4% | 71.1% |
| 3wmyA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.68 | 57.0 | 3.60e-01 | 94.7% | 89.4% |
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 52.0 | 4.23e-01 | 82.5% | 60.8% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.67 | 46.0 | 3.67e-01 | 82.5% | 35.0% |
| 1yrzA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 54.0 | 3.72e-01 | 91.2% | 60.0% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 47.0 | 3.73e-01 | 75.4% | 84.8% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.65 | 48.0 | 3.82e-01 | 82.5% | 45.3% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 49.0 | 4.79e-01 | 82.5% | 85.5% |
| 3vsmA02 | 2.70.98.100 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 | 0.65 | 52.0 | 3.68e-01 | 91.2% | 82.3% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.64 | 53.0 | 3.49e-01 | 94.7% | 95.5% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 52.0 | 3.98e-01 | 93.0% | 50.4% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 48.0 | 4.28e-01 | 82.5% | 94.0% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 52.0 | 3.44e-01 | 93.0% | 100.0% |
| 4a9cA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.64 | 47.0 | 2.98e-01 | 78.9% | 53.6% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.63 | 52.0 | 3.19e-01 | 93.0% | 35.3% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 53.0 | 3.82e-01 | 100.0% | 54.6% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 43.0 | 3.75e-01 | 73.7% | 52.1% |
| 7r8iA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 43.0 | 2.91e-01 | 71.9% | 23.5% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.62 | 52.0 | 3.98e-01 | 98.2% | 90.2% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.62 | 42.0 | 3.20e-01 | 70.2% | 29.4% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.62 | 45.0 | 3.77e-01 | 80.7% | 74.8% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 51.0 | 3.97e-01 | 96.5% | 66.7% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.62 | 47.0 | 3.59e-01 | 84.2% | 49.3% |
| 2z6oA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 51.0 | 3.80e-01 | 100.0% | 57.8% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.61 | 53.0 | 4.06e-01 | 100.0% | 56.4% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.61 | 52.0 | 3.19e-01 | 98.2% | 44.1% |
| 1o70A01 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.60 | 50.0 | 3.92e-01 | 100.0% | 72.1% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.59 | 47.0 | 3.93e-01 | 87.7% | 79.4% |
| 1vgyA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 44.0 | 2.87e-01 | 82.5% | 70.9% |
| 1fuwA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 46.0 | 4.04e-01 | 91.2% | 98.9% |
| 8hpoK01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 50.0 | 3.02e-01 | 100.0% | 86.7% |
| 3zxkA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.33e-01 | 100.0% | 51.4% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 47.0 | 3.81e-01 | 100.0% | 56.7% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 44.0 | 3.01e-01 | 100.0% | 84.5% |
| 5ce6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.54 | 43.0 | 2.87e-01 | 91.2% | 64.9% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 44.0 | 2.86e-01 | 98.2% | 32.3% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 38.0 | 2.98e-01 | 80.7% | 76.7% |
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.51 | 40.0 | 3.44e-01 | 96.5% | 99.1% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 3.63e-01 | 100.0% | 85.1% |
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.51 | 41.0 | 2.75e-01 | 100.0% | 80.3% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960733 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.80 | 55.0 | 4.75e-01 | 71.9% | 71.8% |
| 3391728 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.78 | 58.0 | 5.15e-01 | 80.7% | 58.3% |
| 1760289 | 809.1.1.3 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF3862 | 0.78 | 54.0 | 4.76e-01 | 75.4% | 50.0% |
| 4957722 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.77 | 60.0 | 4.46e-01 | 84.2% | 41.3% |
| 3990496 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.76 | 59.0 | 5.48e-01 | 82.5% | 92.9% |
| 3951937 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.76 | 52.0 | 4.48e-01 | 71.9% | 68.5% |
| 3992567 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 58.0 | 4.47e-01 | 82.5% | 59.2% |
| 3670595 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 51.0 | 4.28e-01 | 70.2% | 51.6% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.75 | 65.0 | 5.34e-01 | 94.7% | 69.0% |
| 5037813 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.75 | 60.0 | 4.71e-01 | 87.7% | 95.8% |
| 3435911 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.75 | 51.0 | 4.12e-01 | 71.9% | 44.5% |
| 5043752 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.75 | 63.0 | 4.09e-01 | 93.0% | 47.3% |
| 3261967 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.74 | 53.0 | 3.54e-01 | 77.2% | 20.4% |
| 3420092 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 50.0 | 4.47e-01 | 71.9% | 62.5% |
| 4008120 | 5.1.5.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 | 0.73 | 58.0 | 4.55e-01 | 87.7% | 88.3% |
| 4046583 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.72 | 61.0 | 4.67e-01 | 93.0% | 45.4% |
| 3968112 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.72 | 56.0 | 4.10e-01 | 84.2% | 34.4% |
| 3264296 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.72 | 60.0 | 4.58e-01 | 94.7% | 64.3% |
| 185415 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.72 | 60.0 | 5.17e-01 | 93.0% | 61.1% |
| 4016816 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 51.0 | 4.50e-01 | 75.4% | 83.5% |
| 5056195 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 54.0 | 3.35e-01 | 82.5% | 28.4% |
| 5054272 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.72 | 60.0 | 3.45e-01 | 93.0% | 13.8% |
| 3961706 | 4.1.1.161 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4178 | 0.72 | 50.0 | 4.84e-01 | 73.7% | 66.2% |
| 5024203 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.71 | 49.0 | 4.22e-01 | 71.9% | 55.6% |
| 4954761 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.71 | 60.0 | 4.79e-01 | 96.5% | 79.2% |
| 4937593 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.71 | 62.0 | 4.18e-01 | 100.0% | 60.1% |
| 4950432 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.70 | 56.0 | 3.89e-01 | 87.7% | 63.2% |
| 4959571 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.70 | 58.0 | 3.79e-01 | 91.2% | 50.6% |
| 4976250 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.70 | 53.0 | 4.24e-01 | 82.5% | 83.5% |
| 5009130 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.70 | 62.0 | 3.79e-01 | 98.2% | 32.5% |
| 4400687 | 2004.1.1.782 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B | 0.70 | 62.0 | 3.65e-01 | 98.2% | 25.5% |
| 4992459 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.70 | 49.0 | 4.60e-01 | 73.7% | 74.3% |
| 3510850 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.70 | 57.0 | 4.96e-01 | 93.0% | 64.4% |
| 5057645 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.69 | 54.0 | 4.37e-01 | 87.7% | 69.6% |
| 4221174 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.69 | 57.0 | 4.84e-01 | 93.0% | 83.2% |
| 5011042 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.68 | 51.0 | 3.93e-01 | 80.7% | 68.5% |
| 3076016 | 4056.1.1.4 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con | 0.68 | 57.0 | 4.64e-01 | 98.2% | 75.0% |
| 3441990 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 55.0 | 3.37e-01 | 91.2% | 37.3% |
| 1170462 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.68 | 48.0 | 4.75e-01 | 75.4% | 70.5% |
| 2051825 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.65 | 54.0 | 3.49e-01 | 94.7% | 91.4% |
| 3224967 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.65 | 53.0 | 3.52e-01 | 91.2% | 23.1% |
| 3710891 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.65 | 47.0 | 3.94e-01 | 77.2% | 89.0% |
| 3795920 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.65 | 54.0 | 4.54e-01 | 94.7% | 89.0% |
| 3573723 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.65 | 56.0 | 3.31e-01 | 100.0% | 75.4% |
| 4940718 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 51.0 | 3.12e-01 | 87.7% | 55.9% |
| 3216873 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.65 | 50.0 | 3.97e-01 | 89.5% | 93.1% |
| 4933710 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.64 | 49.0 | 2.96e-01 | 84.2% | 25.3% |
| 4969674 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 51.0 | 3.19e-01 | 93.0% | 34.2% |
| 9393 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.64 | 54.0 | 3.57e-01 | 96.5% | 91.9% |
| 2723714 | 5.1.3.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin | 0.63 | 52.0 | 3.44e-01 | 96.5% | 95.6% |
| 2336349 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 49.0 | 4.31e-01 | 87.7% | 93.3% |
| 1388847 | 5.1.2.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_62 | 0.62 | 46.0 | 2.89e-01 | 80.7% | 28.0% |
| 4464657 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 53.0 | 4.75e-01 | 94.7% | 73.8% |
| 3700288 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 44.0 | 3.79e-01 | 77.2% | 92.6% |
| 5025460 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 49.0 | 4.71e-01 | 86.0% | 93.8% |
| 3444588 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.61 | 51.0 | 3.18e-01 | 98.2% | 93.2% |
| 4994580 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 48.0 | 2.87e-01 | 91.2% | 83.9% |
| 5047088 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.60 | 47.0 | 3.27e-01 | 93.0% | 64.1% |
| 3844416 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.59 | 52.0 | 3.17e-01 | 100.0% | 92.8% |
| 4163583 | 330.4.1.0 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | 0.59 | 46.0 | 4.21e-01 | 87.7% | 82.5% |
| 4949091 | 3053.1.1.1 ↗ | beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd | 0.59 | 43.0 | 3.09e-01 | 82.5% | 81.3% |
| 3910321 | 391.1.2.23 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWD | 0.59 | 51.0 | 3.40e-01 | 98.2% | 45.3% |
| 4846898 | 12.3.1.5 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 | 0.59 | 52.0 | 3.51e-01 | 100.0% | 54.0% |
| 4646686 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 45.0 | 4.27e-01 | 86.0% | 88.6% |
| 2581425 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 45.0 | 4.63e-01 | 87.7% | 96.4% |
| 3267290 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.58 | 48.0 | 3.01e-01 | 94.7% | 93.4% |
| 3709769 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 48.0 | 3.00e-01 | 91.2% | 37.6% |
| 4359254 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 45.0 | 4.20e-01 | 87.7% | 88.0% |
| 3234784 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.58 | 48.0 | 3.75e-01 | 100.0% | 89.3% |
| 3740897 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.57 | 43.0 | 2.71e-01 | 82.5% | 22.7% |
| 4157358 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.57 | 44.0 | 4.01e-01 | 86.0% | 83.3% |
| 3837575 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.57 | 48.0 | 3.00e-01 | 100.0% | 81.6% |
| 3442715 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.57 | 48.0 | 3.06e-01 | 98.2% | 29.2% |
| 4336488 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.56 | 45.0 | 4.23e-01 | 89.5% | 84.3% |
| 3382673 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.55 | 48.0 | 3.07e-01 | 100.0% | 88.2% |
| 3642733 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.55 | 47.0 | 3.01e-01 | 100.0% | 89.2% |
| 3959341 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.54 | 46.0 | 3.58e-01 | 100.0% | 57.1% |
| 3987711 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 43.0 | 2.83e-01 | 100.0% | 64.8% |
| 3791839 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 42.0 | 3.83e-01 | 94.7% | 83.7% |
| 3327098 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.51 | 42.0 | 2.75e-01 | 100.0% | 83.4% |
D2
medium
residues 58-110
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n89A01 | 3.30.310.270 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.57 | 46.0 | 3.18e-01 | 94.3% | 77.4% |
| 2i71A01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.54 | 46.0 | 3.09e-01 | 98.1% | 26.9% |
| 1vx7G00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.54 | 42.0 | 3.29e-01 | 90.6% | 62.1% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.52 | 33.0 | 3.06e-01 | 83.0% | 45.7% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 36.0 | 3.23e-01 | 94.3% | 47.7% |
| 2olsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 43.0 | 3.26e-01 | 100.0% | 86.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070342 | 4043.1.1.2 ↗ | a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_7 | 0.59 | 44.0 | 3.82e-01 | 84.9% | 63.3% |
| 3829789 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.53 | 37.0 | 2.82e-01 | 73.6% | 67.2% |
| 3259505 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.53 | 44.0 | 3.53e-01 | 100.0% | 63.9% |
| 4145438 | 3747.1.1.3 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bbr_C | 0.52 | 45.0 | 3.70e-01 | 98.1% | 63.0% |