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NC_070778.1__YP_010650565.1__PP425_gp025__00025

Bact-Vir

NC_070778.1__YP_010650565.1__PP425_gp025__00025

Identity

Accession:
NC_070778 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-133
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24070.2 best T4_MRH 147.9 2.30e-43 99.2% 86.0%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 32.0 3.42e-01 87.7% 57.5%
3flkA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.54 47.0 3.44e-01 94.6% 86.6%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 46.0 4.45e-01 100.0% 81.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4422980 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.57 44.0 3.97e-01 80.8% 98.9%
3252771 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.54 35.0 4.12e-01 86.9% 100.0%
3788360 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 32.0 2.36e-01 90.8% 22.4%
4055803 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.51 43.0 3.07e-01 93.1% 92.8%