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NC_070779.1__YP_010843858.1__PP427_gp002__00002

Bact-Vir

NC_070779.1__YP_010843858.1__PP427_gp002__00002

Identity

Accession:
NC_070779 ↗
Kingdom:
phage

Quality

86.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Moonvirus› Salmonella_phage_KM16

TaxID: 2797303

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-54
PDB
Domain cluster: representative
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.79 65.0 4.58e-01 88.7% 69.4%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 62.0 4.42e-01 90.6% 49.3%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 62.0 4.28e-01 90.6% 47.3%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.74 65.0 4.82e-01 100.0% 42.8%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 60.0 4.37e-01 88.7% 52.9%
2q74A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.73 64.0 4.83e-01 100.0% 47.3%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.73 64.0 4.58e-01 100.0% 47.8%
4j5tA01 2.70.98.110 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycosyl hydrolase family 63, N-terminal domain 0.73 62.0 3.84e-01 96.2% 67.1%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 60.0 4.23e-01 92.5% 52.5%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.72 65.0 4.29e-01 100.0% 26.6%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 53.0 3.65e-01 79.2% 53.6%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 58.0 4.34e-01 90.6% 55.4%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.71 48.0 3.49e-01 71.7% 68.7%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.71 55.0 4.21e-01 96.2% 36.5%
3stoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.70 58.0 4.22e-01 92.5% 74.7%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.70 59.0 4.57e-01 96.2% 59.5%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.70 62.0 4.53e-01 100.0% 72.7%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 57.0 4.24e-01 90.6% 55.6%
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.69 56.0 3.31e-01 94.3% 17.2%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.69 60.0 4.26e-01 100.0% 66.7%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 56.0 4.07e-01 88.7% 52.5%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 4.00e-01 100.0% 55.0%
2uurA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 55.0 3.68e-01 88.7% 38.6%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 56.0 3.42e-01 92.5% 28.0%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 55.0 4.12e-01 90.6% 54.3%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 56.0 3.44e-01 92.5% 41.2%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 56.0 3.73e-01 90.6% 69.9%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 53.0 3.21e-01 92.5% 36.7%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 58.0 3.91e-01 98.1% 63.1%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.66 53.0 3.91e-01 90.6% 72.6%
1qwyA02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.66 53.0 3.65e-01 86.8% 46.5%
2fbeA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.66 54.0 3.68e-01 90.6% 81.4%
5nz7A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.66 56.0 3.47e-01 100.0% 81.1%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.65 56.0 4.52e-01 100.0% 71.6%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 54.0 3.49e-01 94.3% 61.3%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 52.0 3.27e-01 90.6% 40.5%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.64 55.0 3.99e-01 100.0% 68.5%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.64 54.0 4.05e-01 100.0% 94.5%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.64 50.0 4.19e-01 86.8% 50.0%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.64 52.0 3.32e-01 92.5% 32.1%
3zpyB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 55.0 3.45e-01 92.5% 51.8%
5ocrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 3.29e-01 90.6% 78.1%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 52.0 3.28e-01 90.6% 80.1%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 47.0 2.94e-01 83.0% 45.5%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.62 51.0 3.37e-01 90.6% 71.3%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 49.0 4.10e-01 86.8% 73.9%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 3.40e-01 92.5% 78.5%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.49e-01 96.2% 56.8%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 51.0 3.27e-01 96.2% 56.0%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 51.0 3.20e-01 100.0% 81.3%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 3.59e-01 100.0% 60.4%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 3.56e-01 100.0% 57.4%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.60 51.0 4.25e-01 100.0% 60.2%
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 48.0 3.30e-01 92.5% 67.9%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.62e-01 84.9% 67.3%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 48.0 3.02e-01 98.1% 37.2%
2f2hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 47.0 3.81e-01 92.5% 95.4%
4cciA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.05e-01 92.5% 56.1%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 45.0 2.83e-01 94.3% 24.1%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 43.0 3.58e-01 81.1% 44.7%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.05e-01 92.5% 83.2%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 46.0 3.10e-01 94.3% 76.5%
2g3aA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 44.0 3.57e-01 88.7% 66.7%
3tthB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 46.0 3.34e-01 96.2% 93.3%
3itjA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 39.0 3.04e-01 75.5% 92.9%
5h8yD02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.55 43.0 3.14e-01 100.0% 52.7%
1y9wA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 43.0 3.54e-01 88.7% 69.2%
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.54 44.0 4.19e-01 96.2% 95.4%
7e52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 37.0 2.96e-01 75.5% 89.8%
1fl2A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 2.94e-01 75.5% 92.7%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.78e-01 100.0% 30.9%
3girA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.52 38.0 3.33e-01 81.1% 62.8%
4werA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.52 36.0 2.76e-01 77.4% 71.9%
1asuA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 39.0 2.85e-01 84.9% 87.0%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3714740 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.78 70.0 5.31e-01 100.0% 50.0%
3844285 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.78 70.0 4.93e-01 100.0% 37.4%
3916473 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.78 63.0 5.09e-01 88.7% 82.0%
3599562 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.78 62.0 5.27e-01 100.0% 54.1%
3543517 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.77 57.0 4.30e-01 81.1% 98.5%
3995842 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.77 55.0 3.63e-01 75.5% 29.4%
3164272 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.75 66.0 4.77e-01 100.0% 40.7%
1123620 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.75 62.0 4.33e-01 90.6% 48.5%
3700776 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.75 59.0 5.42e-01 100.0% 65.7%
3890448 77.3.1.3 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.74 66.0 5.06e-01 100.0% 48.3%
3585029 3735.1.1.14 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell 0.74 67.0 3.64e-01 100.0% 6.6%
1077 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.74 62.0 4.44e-01 92.5% 50.0%
2157212 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.74 60.0 4.37e-01 88.7% 52.9%
3629564 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.73 67.0 4.79e-01 100.0% 76.6%
3765914 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.73 62.0 4.55e-01 92.5% 51.5%
5032559 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.73 50.0 4.16e-01 73.6% 42.2%
3626422 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.73 67.0 4.74e-01 100.0% 76.0%
3991476 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.73 60.0 4.48e-01 90.6% 53.1%
4020216 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.73 65.0 3.93e-01 100.0% 21.8%
3493831 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.72 54.0 4.09e-01 81.1% 99.2%
4943675 12.3.1.73 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_31_2nd 0.72 64.0 4.20e-01 100.0% 27.1%
3939969 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.72 59.0 3.65e-01 90.6% 24.0%
3792180 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 56.0 5.01e-01 84.9% 97.3%
3799335 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.71 61.0 4.16e-01 100.0% 36.4%
3790425 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 64.0 4.45e-01 100.0% 67.9%
3618917 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 57.0 4.50e-01 88.7% 74.5%
3798957 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 58.0 4.28e-01 90.6% 54.1%
5082792 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.71 59.0 4.42e-01 98.1% 43.4%
3230791 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 55.0 4.34e-01 83.0% 71.0%
5000602 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.70 59.0 4.36e-01 100.0% 41.3%
3583317 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 62.0 4.36e-01 100.0% 71.5%
2844949 10.1.1.45 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Bact_lectin 0.70 52.0 3.43e-01 79.2% 63.3%
3573635 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 60.0 4.25e-01 96.2% 65.6%
5037569 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.69 62.0 4.14e-01 100.0% 27.2%
3705234 5.1.4.73 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N 0.68 57.0 3.23e-01 90.6% 16.2%
3709124 5.1.5.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N 0.68 56.0 3.23e-01 90.6% 17.0%
4028672 7502.1.1.2 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.68 59.0 3.89e-01 100.0% 84.4%
5048874 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.68 59.0 4.17e-01 100.0% 39.6%
3444198 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.68 57.0 4.07e-01 100.0% 41.6%
3214213 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 4.27e-01 84.9% 58.0%
4955147 2004.1.1.293 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.67 58.0 3.52e-01 100.0% 19.2%
3699767 295.1.1.7 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP 0.67 55.0 3.88e-01 90.6% 64.2%
3963561 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.67 52.0 4.70e-01 83.0% 62.9%
5046573 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.67 57.0 4.15e-01 100.0% 38.7%
4100839 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 51.0 5.27e-01 98.1% 92.0%
4017900 5.1.3.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.66 54.0 3.05e-01 92.5% 14.0%
3585860 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 57.0 4.15e-01 98.1% 75.3%
3906241 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 58.0 3.83e-01 100.0% 50.9%
3592926 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.65 51.0 4.17e-01 84.9% 100.0%
3263745 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.65 56.0 4.02e-01 100.0% 32.3%
3256971 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 56.0 3.39e-01 98.1% 36.2%
3734385 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.63 54.0 3.16e-01 94.3% 27.9%
2048191 10.1.1.54 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sialidase-like_CBM 0.63 55.0 3.70e-01 98.1% 52.2%
4600292 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.63 54.0 3.70e-01 100.0% 53.2%
3247905 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.63 51.0 3.46e-01 96.2% 75.6%
4133516 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.62 53.0 4.03e-01 96.2% 66.4%
3587406 331.1.1.2 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Rep_trans 0.61 50.0 3.51e-01 92.5% 42.3%
3166679 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 46.0 2.80e-01 83.0% 11.9%
4995512 4294.1.1.2 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p 0.61 48.0 4.67e-01 90.6% 88.3%
5042979 241.1.1.30 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.60 50.0 3.72e-01 98.1% 66.7%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.21e-01 79.2% 86.7%
3627177 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.60 52.0 3.14e-01 96.2% 51.7%
5068435 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.60 46.0 4.56e-01 86.8% 96.4%
3427155 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.59 46.0 2.96e-01 88.7% 82.7%
4026913 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.59 51.0 4.41e-01 100.0% 92.9%
3447047 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.59 50.0 3.09e-01 98.1% 64.7%
3426629 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.59 49.0 3.66e-01 98.1% 72.7%
3857553 844.1.1.1 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub 0.59 47.0 3.30e-01 100.0% 31.4%
3260335 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.59 50.0 3.07e-01 100.0% 31.9%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 3.17e-01 79.2% 37.1%
2038 4178.1.1.4 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › PF29281 0.58 47.0 3.82e-01 92.5% 96.3%
2389474 4294.1.1.2 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p 0.58 46.0 4.54e-01 92.5% 89.8%
3449349 6043.1.1.4 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.58 46.0 3.75e-01 90.6% 67.6%
3466596 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.57 48.0 3.23e-01 96.2% 81.9%
3809500 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.57 47.0 3.15e-01 96.2% 76.5%
3282187 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.57 47.0 3.70e-01 98.1% 98.4%
5044773 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.57 44.0 4.57e-01 92.5% 94.0%
3648618 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.56 48.0 3.30e-01 98.1% 81.5%
3339684 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.56 47.0 3.64e-01 98.1% 85.4%
None — 0.56 45.0 3.07e-01 96.2% 78.6%
3221919 246.3.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.55 46.0 2.76e-01 94.3% 25.2%
5068490 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 45.0 3.21e-01 96.2% 63.2%
3643018 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.55 46.0 3.05e-01 96.2% 86.0%
3463706 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.55 45.0 2.96e-01 96.2% 70.4%
5051268 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.55 38.0 2.93e-01 75.5% 83.0%
3517194 109.54.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.54 43.0 2.57e-01 98.1% 47.1%
4942805 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.53 39.0 3.35e-01 79.2% 69.4%
3989295 2003.1.2.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.52 37.0 2.92e-01 77.4% 91.7%
3964807 9.7.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › PF28291 0.51 45.0 3.72e-01 100.0% 68.4%
D2 high residues 255-351
PDB
Domain cluster: rep: MW073017.1__QPB08539.1__X__00060__D1038-1127
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13884.12 best Peptidase_S74 25.2 2.20e-05 49.5% 67.2%
D3 medium residues 88-152
PDB
Domain cluster: rep: OM386666.1__UPW39838.1__ESCO58_00001__00001__D456-519
D4 medium residues 161-212
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.68 47.0 4.35e-01 73.1% 84.6%
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.64 44.0 3.22e-01 73.1% 76.6%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.61 42.0 3.79e-01 73.1% 87.8%
3kz5E00 6.10.140.1550 Special › Helix non-globular › Helix Hairpins › 0.60 35.0 3.66e-01 88.5% 58.3%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.59 49.0 3.42e-01 92.3% 62.9%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.59 41.0 3.62e-01 73.1% 62.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.45e-01 94.2% 48.8%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.25e-01 90.4% 62.8%
4bs9A01 3.90.930.60 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.53 33.0 2.82e-01 88.5% 33.7%
1ulvA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 45.0 2.87e-01 100.0% 84.9%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.51 34.0 3.29e-01 96.2% 58.5%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.50 38.0 2.91e-01 90.4% 32.8%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4978884 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.72 49.0 4.34e-01 71.2% 88.0%
5075886 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.72 50.0 4.52e-01 73.1% 84.3%
5049994 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.70 49.0 4.32e-01 73.1% 85.3%
3980770 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.69 63.0 4.34e-01 100.0% 32.1%
4928895 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.69 60.0 3.71e-01 94.2% 20.1%
4946183 243.6.1.12 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.65 44.0 3.94e-01 71.2% 84.0%
3847839 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.64 44.0 2.84e-01 73.1% 15.4%
1164615 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.61 42.0 3.73e-01 73.1% 83.3%
5055306 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 43.0 2.79e-01 73.1% 34.2%
3776456 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 42.0 3.59e-01 75.0% 69.0%
3633088 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 3.09e-01 100.0% 44.9%
1318713 3894.1.1.2 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD 0.58 50.0 3.85e-01 100.0% 52.4%
3445390 305.2.1.0 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.57 39.0 3.09e-01 80.8% 32.2%
3545942 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.57 43.0 2.60e-01 84.6% 43.9%
3858171 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.56 39.0 2.58e-01 75.0% 21.2%
5047980 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 42.0 2.70e-01 92.3% 87.8%
3684888 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.53 42.0 3.07e-01 92.3% 45.2%
3709735 109.4.1.2084 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7051 0.52 46.0 2.92e-01 100.0% 49.8%
3696482 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 35.0 3.06e-01 73.1% 68.5%
3955441 247.1.1.24 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 0.51 35.0 2.30e-01 82.7% 14.9%
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 34.0 3.36e-01 71.2% 89.1%
3888181 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.50 42.0 2.57e-01 96.2% 89.7%