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NC_070779.1__YP_010843979.1__PP427_gp123__00123

Bact-Vir

NC_070779.1__YP_010843979.1__PP427_gp123__00123

Identity

Accession:
NC_070779 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Moonvirus› Salmonella_phage_KM16

TaxID: 2797303

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-70
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.79 55.0 4.15e-01 72.9% 33.8%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 68.0 6.31e-01 100.0% 80.0%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 53.0 3.89e-01 72.9% 32.2%
2fauA02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.76 55.0 4.11e-01 76.3% 67.9%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.75 50.0 3.68e-01 72.9% 27.2%
3toyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.73 57.0 4.43e-01 84.7% 77.2%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.73 48.0 3.83e-01 74.6% 35.4%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.70 61.0 4.73e-01 100.0% 88.1%
4r7vA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 48.0 3.59e-01 72.9% 74.5%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.69 49.0 4.39e-01 76.3% 52.9%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.69 47.0 4.62e-01 71.2% 67.2%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.68 46.0 3.15e-01 71.2% 19.6%
4hynB00 3.40.1550.10 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like 0.68 59.0 4.12e-01 100.0% 94.9%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.68 46.0 3.77e-01 71.2% 43.6%
6wwdB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.67 56.0 3.90e-01 91.5% 97.4%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 53.0 3.46e-01 86.4% 91.2%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.67 51.0 3.85e-01 83.1% 45.1%
4liqE05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 50.0 4.11e-01 78.0% 83.0%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.67 55.0 4.31e-01 94.9% 88.2%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.67 54.0 4.41e-01 94.9% 52.0%
1vq0A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.67 61.0 4.00e-01 100.0% 59.2%
3ub8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 47.0 3.48e-01 74.6% 30.6%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 47.0 3.63e-01 76.3% 64.3%
2nqlA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 52.0 3.73e-01 84.7% 70.2%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 57.0 4.67e-01 94.9% 78.3%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 56.0 4.55e-01 98.3% 49.2%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 51.0 4.31e-01 96.6% 49.0%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 50.0 3.88e-01 89.8% 35.7%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.65 48.0 3.69e-01 79.7% 46.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.65 45.0 3.24e-01 72.9% 24.3%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.65 51.0 4.07e-01 89.8% 84.3%
1bqgA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 55.0 4.15e-01 93.2% 60.1%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.64 51.0 4.61e-01 98.3% 63.7%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 51.0 3.56e-01 89.8% 44.4%
2c1iA01 3.30.565.50 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.63 45.0 3.70e-01 76.3% 71.2%
3go2A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 52.0 4.17e-01 91.5% 71.1%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.62 45.0 4.53e-01 81.4% 76.3%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.62 47.0 4.81e-01 81.4% 91.1%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 49.0 3.94e-01 91.5% 43.8%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.62 50.0 3.36e-01 89.8% 30.9%
1bdgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 48.0 3.51e-01 84.7% 40.9%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.62 45.0 3.40e-01 76.3% 30.8%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.62 51.0 3.70e-01 93.2% 71.8%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 50.0 3.89e-01 94.9% 43.4%
3zghA00 2.60.40.3400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 46.0 3.34e-01 83.1% 53.7%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 45.0 3.70e-01 94.9% 43.1%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 49.0 4.04e-01 93.2% 83.5%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 2.91e-01 78.0% 20.6%
3pqvA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.60 45.0 3.96e-01 84.7% 93.8%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.59 48.0 3.63e-01 91.5% 80.8%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.59 52.0 4.13e-01 100.0% 90.3%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 47.0 3.22e-01 91.5% 23.4%
1lyvA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 44.0 2.87e-01 83.1% 22.3%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 50.0 4.04e-01 94.9% 69.4%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 38.0 3.27e-01 74.6% 39.2%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.58 44.0 3.10e-01 83.1% 100.0%
2xzmE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 43.0 3.55e-01 83.1% 52.6%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 3.38e-01 76.3% 74.8%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.58 43.0 4.15e-01 86.4% 69.0%
4wy5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 51.0 3.18e-01 98.3% 78.8%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 44.0 3.53e-01 83.1% 82.2%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 3.76e-01 86.4% 70.9%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 43.0 4.18e-01 86.4% 73.2%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 3.88e-01 88.1% 87.8%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.56 48.0 3.27e-01 96.6% 44.1%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 45.0 2.92e-01 94.9% 50.9%
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.56 43.0 3.85e-01 86.4% 67.4%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 42.0 3.45e-01 86.4% 77.6%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 39.0 3.37e-01 79.7% 47.8%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 42.0 2.72e-01 86.4% 20.5%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 36.0 3.66e-01 76.3% 70.0%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 43.0 2.91e-01 100.0% 41.8%
2vqeE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 39.0 3.84e-01 81.4% 81.2%
2jobA00 3.30.160.320 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 3.75e-01 98.3% 72.5%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.52 41.0 3.42e-01 89.8% 47.2%
4hj1A01 2.60.98.50 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › 0.52 42.0 3.20e-01 96.6% 69.3%
3qvsA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 37.0 3.17e-01 76.3% 88.1%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.51 44.0 3.83e-01 100.0% 78.5%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5049952 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.81 56.0 4.49e-01 72.9% 40.0%
4405445 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.79 54.0 5.13e-01 71.2% 62.9%
3628462 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.79 64.0 6.44e-01 89.8% 93.3%
2780879 1172.1.1.1 ↗ beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 0.78 55.0 4.36e-01 72.9% 45.9%
4576687 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.76 63.0 4.40e-01 89.8% 87.1%
5042338 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.76 63.0 4.55e-01 89.8% 92.3%
3363098 295.1.1.5 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Whirly 0.76 68.0 5.58e-01 100.0% 70.5%
4483150 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.76 65.0 4.73e-01 96.6% 36.3%
3917310 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.75 59.0 5.80e-01 86.4% 84.6%
3420926 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.75 58.0 3.51e-01 83.1% 26.0%
4971937 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.74 62.0 4.45e-01 91.5% 93.3%
5069135 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.74 62.0 4.33e-01 91.5% 84.9%
3390600 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.74 53.0 4.93e-01 78.0% 60.0%
3409738 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.73 63.0 6.19e-01 98.3% 90.8%
4299287 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.73 61.0 4.30e-01 91.5% 88.0%
4116893 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.71 59.0 4.22e-01 91.5% 89.4%
5038844 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.71 56.0 5.08e-01 86.4% 72.5%
5000180 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.70 59.0 4.23e-01 91.5% 79.4%
3719807 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.70 58.0 4.49e-01 96.6% 40.0%
4771028 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.69 47.0 4.64e-01 71.2% 68.3%
3517955 101.1.12.3 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.69 60.0 4.54e-01 100.0% 88.7%
3247792 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.69 56.0 4.59e-01 94.9% 46.7%
3862290 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.69 57.0 4.29e-01 96.6% 37.4%
4945562 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.69 57.0 4.06e-01 91.5% 91.4%
3356898 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.69 57.0 4.41e-01 100.0% 57.3%
3961427 4321.1.1.1 ↗ a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › DUF3298 0.68 50.0 3.41e-01 78.0% 71.0%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.68 56.0 4.52e-01 98.3% 46.7%
3405242 5084.5.1.37 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.68 50.0 3.51e-01 78.0% 30.6%
4982570 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.67 47.0 4.50e-01 81.4% 62.9%
3253837 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 49.0 3.07e-01 78.0% 25.9%
416354 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.67 58.0 4.54e-01 94.9% 70.2%
3257603 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.67 54.0 4.45e-01 96.6% 46.7%
3896234 11.1.1.795 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FANCAA 0.67 58.0 4.15e-01 94.9% 85.5%
3507047 244.4.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit 0.67 54.0 4.53e-01 88.1% 58.0%
3693076 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.66 54.0 4.16e-01 96.6% 41.3%
3520868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 52.0 3.91e-01 84.7% 36.4%
4931409 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 54.0 4.25e-01 94.9% 42.3%
3711062 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 54.0 4.56e-01 91.5% 59.0%
3446499 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.66 53.0 4.19e-01 88.1% 72.5%
3484671 3433.1.1.0 ↗ a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain 0.65 45.0 4.85e-01 74.6% 86.0%
3366703 2.1.1.157 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 0.65 52.0 4.00e-01 88.1% 63.7%
139759 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.65 54.0 4.43e-01 93.2% 68.1%
4003150 1116.1.1.1 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin_dom 0.65 45.0 3.20e-01 71.2% 52.7%
3609915 2484.8.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 0.65 54.0 3.45e-01 93.2% 77.4%
5027780 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.65 47.0 4.69e-01 76.3% 90.0%
4976136 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.65 44.0 3.76e-01 71.2% 45.3%
3669779 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.65 53.0 4.14e-01 96.6% 40.7%
3765831 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.64 50.0 4.14e-01 94.9% 46.1%
5047435 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 49.0 3.68e-01 84.7% 34.0%
3317450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 48.0 4.00e-01 83.1% 46.4%
3552840 11.1.1.795 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FANCAA 0.63 55.0 3.99e-01 94.9% 75.0%
3278704 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.63 55.0 5.00e-01 100.0% 86.3%
3997614 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 48.0 3.87e-01 83.1% 45.8%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.63 47.0 4.51e-01 81.4% 68.6%
4027128 896.1.1.2 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.63 53.0 4.91e-01 96.6% 78.2%
5047908 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.62 53.0 3.35e-01 94.9% 41.5%
4975736 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.62 52.0 3.27e-01 94.9% 58.8%
4990951 3535.1.1.0 ↗ a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 0.62 45.0 3.45e-01 76.3% 61.5%
4938125 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.62 53.0 4.69e-01 94.9% 80.0%
3626771 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.62 52.0 3.46e-01 100.0% 85.6%
3643736 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.62 49.0 3.73e-01 88.1% 61.4%
4988603 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.61 52.0 3.29e-01 94.9% 66.9%
5055339 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.61 51.0 3.35e-01 94.9% 85.2%
3816041 2004.1.1.299 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1995 0.61 49.0 3.16e-01 89.8% 74.2%
357202 896.1.1.2 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.61 51.0 4.62e-01 94.9% 72.0%
3875879 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 50.0 3.73e-01 100.0% 69.7%
4177430 7520.1.1.1 ↗ a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.60 50.0 3.73e-01 91.5% 82.7%
3880705 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.60 48.0 3.92e-01 94.9% 48.0%
3206632 896.1.1.2 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.60 47.0 4.36e-01 94.9% 77.6%
4964699 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.60 47.0 4.05e-01 89.8% 53.0%
3382312 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.59 46.0 3.03e-01 88.1% 22.1%
5058531 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 43.0 3.76e-01 81.4% 79.0%
4522783 101.1.2.715 ↗ alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.58 47.0 3.11e-01 94.9% 19.3%
4330018 330.1.1.6 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C 0.58 47.0 4.41e-01 91.5% 74.7%
3678038 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.58 47.0 4.44e-01 94.9% 73.3%
3579994 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 3.99e-01 96.6% 85.0%
3759486 330.1.1.2 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 0.58 43.0 3.90e-01 81.4% 58.7%
4025486 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.58 44.0 3.37e-01 83.1% 53.6%
3297678 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 40.0 3.30e-01 84.7% 38.3%
3541127 2.1.1.170 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB2 0.57 44.0 4.16e-01 88.1% 70.7%
3931674 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 3.81e-01 94.9% 80.0%
4887510 3274.1.1.1 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.56 41.0 3.77e-01 83.1% 64.3%
4838879 3274.1.1.1 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.55 40.0 3.68e-01 79.7% 61.3%
3783011 5.1.2.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT 0.54 44.0 2.62e-01 100.0% 26.1%
973647 11.13.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin 0.53 41.0 2.87e-01 91.5% 87.4%
4990321 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.53 41.0 2.94e-01 94.9% 61.3%
3807621 2.1.1.348 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223, Rep-A_N 0.52 43.0 2.84e-01 96.6% 32.7%
5004264 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 39.0 3.17e-01 84.7% 46.3%
3356276 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.52 42.0 3.45e-01 96.6% 72.0%