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NC_070779.1__YP_010844100.1__PP427_gp244__00244
Bact-VirNC_070779.1__YP_010844100.1__PP427_gp244__00244
Identity
- Accession:
- NC_070779 ↗
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Moonvirus›
Salmonella_phage_KM16
TaxID: 2797303
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
rep: NC_021798.1__YP_008241634.1__Phi17-2_gp139__00139__D3-80
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17602.8 best | DUF5498 | 65.5 | 7.00e-18 | 100.0% | 97.9% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l3aA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.89e-01 | 96.8% | 88.7% |
| 1eq6A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.59 | 45.0 | 3.67e-01 | 94.7% | 41.3% |
| 4cu7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.61e-01 | 94.7% | 95.0% |
| 6mfaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.73e-01 | 98.9% | 100.0% |
| 1t82A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 42.0 | 3.68e-01 | 79.8% | 97.9% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 50.0 | 4.24e-01 | 100.0% | 64.9% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 4.68e-01 | 93.6% | 96.6% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.55 | 43.0 | 3.58e-01 | 86.2% | 65.9% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 4.68e-01 | 93.6% | 97.8% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 41.0 | 3.59e-01 | 79.8% | 86.9% |
| 7rskA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.28e-01 | 93.6% | 98.2% |
| 2geeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.46e-01 | 93.6% | 95.6% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 41.0 | 2.96e-01 | 86.2% | 38.3% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 3.49e-01 | 80.9% | 93.0% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.26e-01 | 94.7% | 82.6% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.52 | 43.0 | 3.94e-01 | 94.7% | 89.3% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.96e-01 | 100.0% | 75.0% |
| 6x1kA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 45.0 | 4.30e-01 | 100.0% | 98.3% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.50e-01 | 84.0% | 89.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3415385 | 11.2.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4788 | 0.59 | 53.0 | 4.70e-01 | 100.0% | 94.1% |
| 4299577 | 3121.1.1.15 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › FabA | 0.58 | 37.0 | 4.15e-01 | 100.0% | 85.7% |
| 4937954 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 52.0 | 4.92e-01 | 100.0% | 97.3% |
| 3994059 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.58 | 36.0 | 3.94e-01 | 100.0% | 77.3% |
| 4936907 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.80e-01 | 100.0% | 96.4% |
| 3591507 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 4.34e-01 | 85.1% | 97.3% |
| 3649488 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 49.0 | 4.11e-01 | 100.0% | 98.1% |
| 5081502 | 4252.1.1.1 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › CrtC | 0.54 | 48.0 | 4.26e-01 | 100.0% | 97.1% |
| 3989983 | 274.1.1.49 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › SSURE | 0.54 | 44.0 | 3.87e-01 | 94.7% | 91.0% |
| 4360820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.32e-01 | 93.6% | 93.6% |
| 4010974 | 5.1.5.165 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Rrn6_beta-prop | 0.53 | 49.0 | 3.06e-01 | 100.0% | 96.8% |
| 3743883 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 45.0 | 3.84e-01 | 94.7% | 64.5% |
| 5012013 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.53 | 42.0 | 3.71e-01 | 87.2% | 94.3% |
| 3946522 | 9.1.1.36 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3833 | 0.52 | 46.0 | 3.97e-01 | 100.0% | 86.5% |
| 3510139 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.52 | 45.0 | 3.53e-01 | 94.7% | 81.0% |
| 3240771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.48e-01 | 100.0% | 97.3% |
| 4611376 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 44.0 | 2.91e-01 | 94.7% | 42.1% |
| 3952686 | 4252.1.1.1 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › CrtC | 0.51 | 45.0 | 4.08e-01 | 100.0% | 96.2% |
| 3612850 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.51 | 41.0 | 3.49e-01 | 89.4% | 85.5% |
| 3519907 | 3333.1.1.1 ↗ | a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_B | 0.50 | 43.0 | 3.66e-01 | 98.9% | 89.1% |