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NC_070783.1__YP_010651735.1__PP456_gp131__00122

Bact-Vir

NC_070783.1__YP_010651735.1__PP456_gp131__00122

Identity

Accession:
NC_070783 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-58
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.85 77.0 5.92e-01 100.0% 52.3%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 64.0 6.69e-01 100.0% 89.1%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.84 68.0 6.51e-01 100.0% 77.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 68.0 6.80e-01 100.0% 88.2%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.81 73.0 5.31e-01 100.0% 60.9%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 74.0 7.13e-01 100.0% 89.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 64.0 6.61e-01 100.0% 91.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.53e-01 100.0% 79.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 69.0 6.43e-01 100.0% 77.8%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 6.85e-01 100.0% 94.1%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.75 69.0 5.43e-01 100.0% 65.7%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 65.0 4.71e-01 100.0% 39.8%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 65.0 6.13e-01 100.0% 95.0%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.71 60.0 5.73e-01 100.0% 81.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.68e-01 100.0% 86.6%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.89e-01 100.0% 95.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.58e-01 100.0% 80.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.33e-01 100.0% 82.7%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 5.55e-01 100.0% 96.9%
3k50A02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.68 53.0 4.32e-01 88.2% 59.0%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 50.0 4.42e-01 86.3% 55.4%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 4.81e-01 100.0% 70.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.77e-01 100.0% 96.2%
4a27A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.67 56.0 4.02e-01 98.0% 62.7%
2vn8A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.65 56.0 3.93e-01 100.0% 65.7%
3tqhA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.65 54.0 3.81e-01 98.0% 58.2%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.12e-01 100.0% 84.8%
4dupA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.65 55.0 3.82e-01 100.0% 52.9%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.80e-01 100.0% 80.5%
3uogA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.65 56.0 3.83e-01 100.0% 61.4%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.65 53.0 3.82e-01 98.0% 33.7%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.64 55.0 3.76e-01 100.0% 29.3%
5dovB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.64 55.0 3.75e-01 100.0% 54.8%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.63 53.0 4.21e-01 100.0% 49.1%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 49.0 3.90e-01 90.2% 87.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 49.0 4.60e-01 100.0% 72.7%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.52e-01 90.2% 93.4%
1qorA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.58 47.0 3.40e-01 100.0% 54.4%
2pa4A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 43.0 2.76e-01 86.3% 32.0%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.56 48.0 4.33e-01 100.0% 87.8%
2dyiA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.52 41.0 3.87e-01 100.0% 80.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 3.97e-01 100.0% 96.9%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 44.0 3.80e-01 100.0% 72.3%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3619215 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 75.0 5.78e-01 100.0% 47.0%
3516048 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 72.0 5.63e-01 100.0% 46.0%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.85 74.0 4.91e-01 100.0% 26.9%
3555930 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.85 74.0 6.54e-01 100.0% 67.1%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.85 74.0 5.74e-01 100.0% 47.0%
4547820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 74.0 5.65e-01 100.0% 44.8%
3476179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 74.0 5.81e-01 100.0% 49.5%
3222146 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.84 73.0 6.65e-01 100.0% 72.3%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.84 72.0 5.30e-01 100.0% 39.2%
3781710 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.83 79.0 6.57e-01 100.0% 63.7%
4078120 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.83 79.0 7.65e-01 100.0% 92.7%
3245798 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 67.0 3.51e-01 94.1% 2.9%
3820065 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 69.0 6.78e-01 100.0% 85.5%
3751502 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.81 74.0 6.61e-01 100.0% 72.9%
3296833 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.81 74.0 5.27e-01 100.0% 37.0%
3450257 4.1.1.150 beta barrels › SH3 › SH3 › SH3 › DUF3123 0.79 72.0 5.77e-01 100.0% 66.3%
3482225 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.79 73.0 5.27e-01 100.0% 39.2%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.79 70.0 6.62e-01 100.0% 81.7%
3834563 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.79 72.0 6.12e-01 100.0% 73.8%
4168653 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.78 66.0 6.71e-01 100.0% 94.0%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.77 70.0 5.15e-01 100.0% 41.7%
3826751 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 71.0 5.96e-01 100.0% 72.5%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.76 63.0 6.17e-01 100.0% 83.6%
3373583 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 69.0 6.16e-01 100.0% 82.9%
3669494 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 69.0 4.83e-01 100.0% 39.3%
3229184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 69.0 5.70e-01 100.0% 89.4%
2410381 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 67.0 5.71e-01 100.0% 78.5%
3707346 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.59e-01 100.0% 79.5%
3678872 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.73 67.0 5.81e-01 100.0% 86.7%
3339162 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.73 66.0 4.80e-01 100.0% 47.7%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 65.0 6.00e-01 100.0% 89.2%
3658643 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 65.0 4.62e-01 100.0% 40.0%
3946297 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.72 60.0 5.41e-01 100.0% 68.6%
3319789 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 64.0 5.39e-01 100.0% 70.6%
3229356 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 66.0 5.07e-01 100.0% 63.8%
3597361 4.23.1.0 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.71 61.0 4.61e-01 100.0% 58.5%
4349149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 64.0 5.25e-01 100.0% 82.2%
3625263 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 65.0 5.10e-01 100.0% 63.0%
4998666 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.71 62.0 4.08e-01 100.0% 41.0%
3812766 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 62.0 5.59e-01 100.0% 85.7%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.70 61.0 5.53e-01 100.0% 77.1%
4611807 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.69 60.0 4.22e-01 100.0% 60.6%
4398865 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 61.0 4.93e-01 100.0% 84.2%
3706000 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 60.0 5.28e-01 100.0% 89.3%
3182097 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 56.0 5.16e-01 90.2% 73.8%
3734748 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.68 59.0 3.97e-01 100.0% 55.3%
3214653 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 62.0 4.94e-01 100.0% 55.8%
4976896 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 60.0 4.87e-01 100.0% 55.8%
3819397 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.67 60.0 5.16e-01 100.0% 70.0%
3594811 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 61.0 5.61e-01 100.0% 98.5%
4014568 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.67 54.0 5.35e-01 90.2% 87.3%
4468803 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.67 58.0 4.50e-01 100.0% 93.0%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.03e-01 100.0% 73.8%
3744711 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.65 56.0 3.93e-01 100.0% 32.9%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 5.49e-01 100.0% 90.9%
4220355 2003.1.3.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO, Pyr_redox_2 0.65 55.0 3.57e-01 100.0% 62.4%
4962071 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.65 55.0 3.31e-01 100.0% 51.6%
4020511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.09e-01 100.0% 40.0%
3394789 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.32e-01 100.0% 52.7%
3791530 236.1.1.5 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N_2 0.63 55.0 3.85e-01 100.0% 64.7%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.62 53.0 4.42e-01 100.0% 60.0%
3700518 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.61 48.0 3.82e-01 100.0% 60.8%
3706361 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.02e-01 100.0% 64.8%
3386124 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.60 43.0 3.85e-01 92.2% 51.2%
4101535 331.3.1.10 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.58 49.0 3.65e-01 100.0% 70.3%
3278081 2.4.1.15 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2, CysA_C_terminal 0.57 48.0 3.64e-01 94.1% 46.7%
3421079 2003.1.2.102 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 0.55 45.0 2.90e-01 96.1% 47.1%
4085451 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 41.0 3.34e-01 94.1% 45.5%