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NC_070784.1__YP_010651886.1__PP457_gp213__00034
Bact-VirNC_070784.1__YP_010651886.1__PP457_gp213__00034
Identity
- Accession:
- NC_070784 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stanwilliamsviridae›
Faustvirus›
Streptomyces_phage_TunaTartare
TaxID: 2848887
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-113
Domain cluster:
rep: NC_028805.1__YP_009199094.1__AVV11_gp158__00033__D58-151
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2di3B02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.63 | 49.0 | 4.29e-01 | 82.9% | 72.9% |
| 1nh1A01 | 1.10.3290.20 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › | 0.62 | 43.0 | 3.49e-01 | 71.4% | 90.8% |
| 1sdiA00 | 1.10.3890.10 | Mainly Alpha › Orthogonal Bundle › YcfC-like › HflD-like | 0.56 | 45.0 | 3.61e-01 | 85.7% | 80.3% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 37.0 | 4.13e-01 | 95.2% | 88.2% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 3.85e-01 | 100.0% | 99.0% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 43.0 | 4.13e-01 | 85.7% | 91.5% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 47.0 | 3.80e-01 | 100.0% | 97.6% |
| 1aluA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 34.0 | 3.00e-01 | 83.8% | 44.6% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.51 | 35.0 | 3.34e-01 | 85.7% | 58.1% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.51 | 40.0 | 3.26e-01 | 82.9% | 61.0% |
| 2k3oA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.50 | 41.0 | 3.86e-01 | 90.5% | 93.0% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 36.0 | 3.59e-01 | 73.3% | 84.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3544883 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.60 | 41.0 | 4.48e-01 | 90.5% | 87.1% |
| 4161112 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.59 | 48.0 | 3.83e-01 | 88.6% | 94.4% |
| 3646875 | 109.4.1.1136 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N | 0.59 | 33.0 | 3.27e-01 | 85.7% | 49.6% |
| 3564291 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.57 | 38.0 | 4.18e-01 | 90.5% | 85.9% |
| 3947893 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.55 | 38.0 | 3.55e-01 | 87.6% | 57.7% |
| 4286279 | 206.1.3.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL, ATPgrasp_YheCD | 0.54 | 37.0 | 2.59e-01 | 79.0% | 20.0% |
| 4283506 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.53 | 40.0 | 4.30e-01 | 100.0% | 94.4% |
| 3226696 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 38.0 | 3.09e-01 | 74.3% | 48.4% |
| 3900653 | 109.4.1.1672 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUF, CPL | 0.53 | 40.0 | 2.48e-01 | 78.1% | 17.6% |
| 3889863 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 38.0 | 3.68e-01 | 75.2% | 93.3% |
| 3269933 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.52 | 34.0 | 3.90e-01 | 79.0% | 97.1% |
| 3549899 | 109.4.1.106 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CPL | 0.51 | 40.0 | 2.51e-01 | 81.9% | 17.8% |
| 4854886 | 304.48.1.12 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mononeg_RNA_pol | 0.51 | 40.0 | 3.85e-01 | 84.8% | 73.8% |
| 3998525 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.50 | 36.0 | 2.98e-01 | 73.3% | 47.8% |