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NC_070786.1__YP_010652343.1__PP460_gp215__00029

Bact-Vir

NC_070786.1__YP_010652343.1__PP460_gp215__00029

Identity

Accession:
NC_070786 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Wakandavirus› Streptomyces_phage_Muntaha

TaxID: 2713269

Cluster

View cluster (74 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-209
PDB
Domain cluster: rep: KR816341.1__AKQ06892.1__X__00033__D8-203
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25681.2 best Phage_TTP_17 33.8 4.00e-08 92.9% 81.0%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.70 46.0 5.42e-01 98.5% 93.4%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.68 47.0 5.22e-01 100.0% 87.2%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 25.0 3.81e-01 91.4% 95.1%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 30.0 3.93e-01 96.4% 87.7%
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 23.0 3.23e-01 98.0% 74.7%
2weiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 24.0 3.32e-01 98.5% 82.2%
2daxA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 24.0 2.83e-01 99.5% 54.6%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.54 31.0 3.89e-01 94.9% 92.4%
6lynD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 24.0 3.45e-01 76.6% 96.6%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 26.0 3.53e-01 76.1% 93.1%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 19.0 2.62e-01 98.0% 62.7%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 27.0 3.20e-01 94.9% 74.6%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943316 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.87 65.0 7.19e-01 100.0% 93.8%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.86 62.0 7.04e-01 100.0% 94.2%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 65.0 7.14e-01 99.0% 98.8%
3590380 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 62.0 6.46e-01 100.0% 85.6%
3976188 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.80 53.0 5.83e-01 99.5% 80.0%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.80 51.0 6.20e-01 98.0% 96.2%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 51.0 6.23e-01 99.5% 97.7%
2101633 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.78 51.0 5.56e-01 99.5% 77.2%
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.78 49.0 4.36e-01 100.0% 45.6%
4954552 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 57.0 6.28e-01 98.0% 95.0%
2832217 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.72 48.0 5.58e-01 99.0% 93.7%
4034209 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.72 48.0 5.84e-01 91.9% 100.0%
3965192 1.1.13.67 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 0.72 42.0 5.47e-01 90.4% 100.0%
1444177 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 45.0 5.38e-01 97.5% 92.6%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.70 41.0 5.26e-01 92.4% 99.1%
4033579 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.70 44.0 5.48e-01 94.9% 100.0%
184986 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.69 43.0 5.29e-01 97.0% 98.4%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.68 44.0 4.94e-01 98.5% 82.7%
5004559 1.1.13.75 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.67 46.0 5.40e-01 89.3% 100.0%
3981111 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.61 31.0 3.48e-01 79.2% 60.0%
4946616 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 21.0 3.07e-01 97.5% 68.9%
4947401 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.54 36.0 4.02e-01 100.0% 85.2%
4944685 1.1.5.18 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.52 34.0 3.90e-01 99.5% 88.0%
3232476 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 21.0 2.92e-01 98.0% 73.0%
4997723 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.51 35.0 3.86e-01 100.0% 87.7%
3475901 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 22.0 3.05e-01 96.4% 83.3%