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NC_070786.1__YP_010652405.1__PP460_gp153__00091
Bact-VirNC_070786.1__YP_010652405.1__PP460_gp153__00091
Identity
- Accession:
- NC_070786 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stanwilliamsviridae›
Wakandavirus›
Streptomyces_phage_Muntaha
TaxID: 2713269
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-85
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 46.0 | 4.26e-01 | 70.0% | 46.9% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.76 | 48.0 | 4.86e-01 | 72.5% | 64.2% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 43.0 | 4.27e-01 | 88.7% | 56.6% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 38.0 | 4.45e-01 | 78.8% | 75.4% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 38.0 | 3.89e-01 | 80.0% | 55.1% |
| 3aafA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 46.0 | 4.08e-01 | 71.2% | 59.6% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 49.0 | 4.18e-01 | 88.7% | 54.3% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 50.0 | 4.18e-01 | 93.8% | 69.9% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 3.76e-01 | 87.5% | 59.6% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 52.0 | 4.74e-01 | 98.8% | 96.2% |
| 2ctfA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 34.0 | 3.18e-01 | 70.0% | 47.1% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.48e-01 | 78.8% | 62.4% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 32.0 | 3.34e-01 | 71.2% | 58.4% |
| 1owqA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 30.0 | 3.24e-01 | 82.5% | 58.8% |
| 1p4xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.87e-01 | 86.3% | 75.6% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 48.0 | 4.39e-01 | 95.0% | 84.3% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 48.0 | 3.90e-01 | 95.0% | 66.2% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.32e-01 | 88.7% | 82.2% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 48.0 | 3.96e-01 | 98.8% | 70.1% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 49.0 | 4.04e-01 | 98.8% | 70.5% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 48.0 | 4.04e-01 | 98.8% | 72.2% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.70e-01 | 95.0% | 68.6% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.74e-01 | 78.8% | 94.1% |
| 2bv6A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.82e-01 | 98.8% | 69.1% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.51 | 36.0 | 3.88e-01 | 77.5% | 84.5% |
| 3ffhA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 40.0 | 3.39e-01 | 85.0% | 89.4% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.93e-01 | 85.0% | 93.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997343 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.85 | 45.0 | 4.73e-01 | 71.2% | 57.3% |
| 3287376 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.83 | 47.0 | 3.57e-01 | 88.7% | 26.3% |
| 4972274 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 43.0 | 4.63e-01 | 70.0% | 60.0% |
| 5017399 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.81 | 45.0 | 3.59e-01 | 72.5% | 30.0% |
| 4940464 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.81 | 45.0 | 3.99e-01 | 71.2% | 40.0% |
| 4600617 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.80 | 43.0 | 3.41e-01 | 82.5% | 28.7% |
| 4992272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 53.0 | 4.58e-01 | 88.7% | 46.7% |
| 5036720 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 43.0 | 4.25e-01 | 71.2% | 53.6% |
| 3594005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 45.0 | 3.48e-01 | 88.7% | 30.3% |
| 5045953 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 4.09e-01 | 72.5% | 56.0% |
| 3950191 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.68 | 47.0 | 3.44e-01 | 71.2% | 28.8% |
| 5080189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 41.0 | 3.67e-01 | 71.2% | 46.4% |
| 4969597 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 50.0 | 4.02e-01 | 88.7% | 43.4% |
| 3975404 | 4137.1.1.1 ↗ | a+b three layers › YehU-like › YehU-like › YehU-like › UPF0270 | 0.66 | 36.0 | 3.82e-01 | 81.2% | 61.4% |
| 3407169 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.65 | 47.0 | 4.31e-01 | 76.2% | 93.3% |
| 3782381 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.64 | 42.0 | 3.60e-01 | 83.7% | 42.4% |
| 3232477 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.64 | 36.0 | 3.31e-01 | 71.2% | 43.0% |
| 3648804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 45.0 | 3.98e-01 | 88.7% | 52.2% |
| 3197267 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 56.0 | 3.38e-01 | 98.8% | 59.2% |
| 5050401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 48.0 | 4.41e-01 | 81.2% | 72.0% |
| 4115268 | 4137.1.1.1 ↗ | a+b three layers › YehU-like › YehU-like › YehU-like › UPF0270 | 0.61 | 34.0 | 3.64e-01 | 78.8% | 62.3% |
| 3746945 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.60 | 45.0 | 2.71e-01 | 81.2% | 60.8% |
| 3715856 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.58 | 47.0 | 4.51e-01 | 85.0% | 92.2% |
| 3651024 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.58 | 48.0 | 4.24e-01 | 87.5% | 97.3% |
| 4943395 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.01e-01 | 71.2% | 40.6% |
| 3965014 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 49.0 | 4.34e-01 | 100.0% | 88.7% |
| 5000359 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.54 | 32.0 | 3.30e-01 | 71.2% | 61.3% |
| 5035783 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.54 | 37.0 | 3.75e-01 | 71.2% | 72.5% |
| 4980177 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.53 | 47.0 | 4.09e-01 | 98.8% | 63.3% |
| 4507638 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 40.0 | 3.15e-01 | 80.0% | 48.5% |
| 3954543 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.53 | 48.0 | 3.90e-01 | 98.8% | 71.3% |
| 3899209 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 40.0 | 3.05e-01 | 82.5% | 91.3% |
| 4028388 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.52 | 35.0 | 2.40e-01 | 70.0% | 40.7% |
| 5049144 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 2.94e-01 | 86.3% | 34.8% |
| 4098159 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.51 | 39.0 | 2.70e-01 | 81.2% | 91.4% |
| 3429256 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 40.0 | 2.76e-01 | 93.8% | 47.6% |
| 4990701 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 46.0 | 3.81e-01 | 96.2% | 65.4% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.08e-01 | 90.0% | 51.2% |