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NC_070786.1__YP_010652535.1__PP460_gp023__00221

Bact-Vir

NC_070786.1__YP_010652535.1__PP460_gp023__00221

Identity

Accession:
NC_070786 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Wakandavirus› Streptomyces_phage_Muntaha

TaxID: 2713269

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-134
PDB
Domain cluster: rep: OK040794.1__UDL16718.1__SEA_ATUIN_124__00124__D3-120
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.72 19.0 3.39e-01 71.2% 66.7%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.69 35.0 4.23e-01 100.0% 72.5%
1ui6A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 38.0 3.32e-01 93.2% 42.7%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 41.0 3.96e-01 72.7% 87.8%
5oomJ01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.56 19.0 2.61e-01 93.2% 53.0%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 41.0 3.41e-01 80.3% 47.1%
5x8tT00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.53 26.0 2.56e-01 72.7% 38.9%
3ig5A02 3.30.590.50 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.53 44.0 3.11e-01 86.4% 74.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4416267 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.74 23.0 3.84e-01 80.3% 76.0%
3036200 108.2.1.0 ↗ alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins 0.63 30.0 3.13e-01 99.2% 46.5%
4532543 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 41.0 4.07e-01 71.2% 90.7%
4953075 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.57 33.0 3.22e-01 100.0% 49.0%
5069467 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 41.0 3.99e-01 72.7% 89.0%
4936526 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 39.0 3.91e-01 70.5% 84.1%
4799073 309.1.1.4 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.57 26.0 3.01e-01 93.9% 58.2%
3817420 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 40.0 3.64e-01 72.0% 84.6%
4485921 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 40.0 4.20e-01 72.7% 95.8%
4140340 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 39.0 3.78e-01 72.0% 88.0%
3699463 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 39.0 3.30e-01 73.5% 53.0%
4626792 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 37.0 3.64e-01 70.5% 100.0%
3194847 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.54 39.0 2.53e-01 75.0% 20.2%
3409778 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 3.82e-01 72.7% 89.2%
3457354 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 3.61e-01 72.0% 84.8%
3396714 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 3.66e-01 73.5% 85.5%
3709607 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 38.0 3.49e-01 75.0% 80.6%
3653800 377.12.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e 0.52 19.0 2.32e-01 99.2% 45.9%
3627410 3447.1.1.1 ↗ alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 0.51 34.0 2.86e-01 72.0% 40.0%
3597447 5076.1.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.51 40.0 3.11e-01 100.0% 37.3%
3385027 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.51 39.0 3.07e-01 100.0% 36.9%
4595166 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.51 37.0 3.13e-01 76.5% 93.3%
3220913 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 37.0 2.76e-01 100.0% 30.2%
3220363 3447.1.1.1 ↗ alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 0.50 34.0 2.92e-01 72.7% 43.3%