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NC_070795.1__YP_010653256.1__PP491_gp63__00063

Bact-Vir

NC_070795.1__YP_010653256.1__PP491_gp63__00063

Identity

Accession:
NC_070795 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nymphadoravirus› Gordonia_phage_BoyNamedSue

TaxID: 2836009

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-144
PDB
Domain cluster: representative
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3236563 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.69 38.0 4.05e-01 77.8% 61.6%
4941675 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.68 49.0 3.34e-01 89.6% 22.1%
4981316 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.64 54.0 4.76e-01 88.9% 88.0%
4943172 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.61 50.0 4.46e-01 86.1% 87.0%
5041611 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.61 49.0 4.40e-01 84.0% 86.7%
4083043 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.60 50.0 4.45e-01 89.6% 81.3%
5050213 192.2.1.87 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D 0.60 49.0 4.45e-01 86.8% 92.6%
4934439 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.54 48.0 3.34e-01 95.8% 39.3%