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NC_070817.1__YP_010654875.1__PP513_gp14__00014
Bact-VirNC_070817.1__YP_010654875.1__PP513_gp14__00014
Identity
- Accession:
- NC_070817 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25355.2 best | DUF7882 | 39.0 | 8.80e-10 | 98.9% | 86.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.57 | 39.0 | 3.51e-01 | 85.1% | 50.8% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 46.0 | 3.27e-01 | 95.7% | 84.2% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 3.05e-01 | 85.1% | 89.2% |
| 2rkvA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 47.0 | 3.62e-01 | 100.0% | 61.9% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 40.0 | 2.87e-01 | 79.8% | 85.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4632256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 5.82e-01 | 71.3% | 94.7% |
| 3386877 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.56 | 47.0 | 4.03e-01 | 94.7% | 91.9% |
| 3624120 | 10.32.1.163 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_N | 0.55 | 39.0 | 2.91e-01 | 75.5% | 85.9% |
| 3743318 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.52 | 38.0 | 2.95e-01 | 84.0% | 34.8% |
| 4233683 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.52 | 40.0 | 3.07e-01 | 83.0% | 77.3% |
| 3707442 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.52 | 40.0 | 3.14e-01 | 84.0% | 58.1% |
| 4488103 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.51 | 32.0 | 3.27e-01 | 88.3% | 64.4% |
| 3597958 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 40.0 | 3.08e-01 | 84.0% | 58.1% |
| 3571382 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.51 | 36.0 | 2.33e-01 | 76.6% | 37.9% |
| 4399128 | 7581.1.1.30 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, Thiolase_C | 0.51 | 35.0 | 2.46e-01 | 73.4% | 97.6% |
| 3890518 | 2484.1.1.239 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 | 0.50 | 37.0 | 2.31e-01 | 76.6% | 39.4% |
| 3493732 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 34.0 | 3.46e-01 | 70.2% | 90.5% |