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NC_070817.1__YP_010654896.1__PP513_gp35__00035

Bact-Vir

Identity

Accession:: NC_070817 ↗
Kingdom:: phage

Quality

81.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Howevirus› Gordonia_phage_Howe

TaxID: 1777061

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-182

PDB

Domain cluster: rep: MN813694.1__QHB37877.1__SEA_OPIE_34__00034__D3-128_142-190

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1b04A03	1.10.287.610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.63	23.0	3.68e-01	86.9%	90.3%
3b8bA01	3.30.540.10	Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1	0.58	48.0	5.03e-01	94.9%	96.9%
3hlzA02	1.20.120.1090	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.57	32.0	3.65e-01	92.0%	72.9%
4xa2A01	3.30.700.10	Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin	0.55	36.0	4.28e-01	98.9%	100.0%
2ezvA01	3.40.600.40	Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Type II restriction enzyme SfiI, multifunctional domain	0.54	49.0	4.75e-01	99.4%	90.4%
4r03A00	2.40.128.720	Mainly Beta › Beta Barrel › Lipocalin ›	0.53	25.0	3.06e-01	71.6%	68.8%
3lpzA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	31.0	2.62e-01	83.5%	32.8%
1dbzA01	3.30.540.10	Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1	0.52	47.0	4.70e-01	100.0%	96.2%
1wa8A00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.52	27.0	3.45e-01	92.6%	86.9%
2oqgB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	24.0	3.00e-01	100.0%	69.4%
5cw3C01	3.40.140.10	Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2	0.51	40.0	4.32e-01	97.7%	100.0%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3956535	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.95	82.0	8.79e-01	90.9%	100.0%
3512341	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.77	32.0	5.08e-01	72.7%	98.6%
4627429	2008.1.1.180 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27366, PF30697	0.66	60.0	5.25e-01	99.4%	97.4%
4624818	621.1.1.0 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0.58	30.0	4.06e-01	72.7%	96.7%
3344229	3012.1.1.0 ↗	a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain	0.56	24.0	3.58e-01	80.1%	100.0%
5016606	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	29.0	3.21e-01	76.7%	61.4%
5029389	601.17.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Group V grass pollen allergen › Group V grass pollen allergen	0.53	36.0	3.89e-01	94.9%	82.1%
4951992	5041.1.1.55 ↗	extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › DUF1622	0.52	25.0	3.32e-01	85.2%	81.0%
3312536	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.51	37.0	3.89e-01	87.5%	81.9%