←Back to structures
NC_070818.1__YP_010655016.1__PP514_gp75__00075
Bact-VirNC_070818.1__YP_010655016.1__PP514_gp75__00075
Identity
- Accession:
- NC_070818 ↗
- Kingdom:
- phage
Quality
69.9
mean pLDDT
Taxonomy
TaxID: 2652881
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-100
Domain cluster:
rep: BK061311.1__DAZ90241.1__PROPHIFSIL01-1_54__00054__D24-110
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.60 | 35.0 | 3.39e-01 | 100.0% | 50.5% |
| 3f2kB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 42.0 | 3.32e-01 | 72.5% | 73.8% |
| 6y79C01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.59 | 45.0 | 3.01e-01 | 82.4% | 99.7% |
| 2ichA01 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.55 | 48.0 | 3.92e-01 | 100.0% | 93.9% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 46.0 | 3.72e-01 | 100.0% | 82.5% |
| 6dxwA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.51 | 44.0 | 3.35e-01 | 96.7% | 90.8% |
| 6hxiA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.51 | 35.0 | 2.77e-01 | 81.3% | 32.7% |
| 3c3dA02 | 1.10.8.240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain | 0.50 | 40.0 | 4.12e-01 | 87.9% | 87.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3601594 | 848.1.1.0 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain | 0.60 | 52.0 | 3.63e-01 | 97.8% | 99.4% |
| 3829068 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.60 | 37.0 | 2.71e-01 | 86.8% | 24.3% |
| 3638899 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.58 | 45.0 | 2.80e-01 | 83.5% | 25.1% |
| 3701806 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.58 | 51.0 | 3.59e-01 | 100.0% | 98.0% |
| 4241931 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.55 | 43.0 | 3.35e-01 | 87.9% | 83.2% |
| 3656144 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.55 | 43.0 | 3.30e-01 | 89.0% | 80.2% |
| None | — | 0.55 | 43.0 | 3.44e-01 | 89.0% | 90.4% | |
| 4976410 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 31.0 | 2.67e-01 | 100.0% | 34.7% |
| 4029843 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.53 | 42.0 | 3.25e-01 | 89.0% | 83.8% |
| 3531867 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.53 | 44.0 | 3.55e-01 | 100.0% | 46.1% |
| 3288144 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.52 | 37.0 | 3.67e-01 | 73.6% | 100.0% |
| 3367679 | 225.1.1.13 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HSP90 | 0.52 | 40.0 | 3.46e-01 | 89.0% | 97.6% |
| 3689156 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.52 | 47.0 | 3.73e-01 | 100.0% | 64.4% |
| None | — | 0.52 | 41.0 | 3.24e-01 | 89.0% | 85.7% | |
| 3211215 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.28e-01 | 100.0% | 40.0% |
| 3677315 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.50 | 39.0 | 3.08e-01 | 84.6% | 87.0% |
| 3979087 | 4100.1.1.7 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PF27115 | 0.50 | 34.0 | 3.80e-01 | 94.5% | 91.4% |