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NC_070830.1__YP_010655701.1__PP631_gp095__00095
Bact-VirNC_070830.1__YP_010655701.1__PP631_gp095__00095
Identity
- Accession:
- NC_070830 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
TaxID: 2848886
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-64
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jqjC02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.55 | 42.0 | 3.70e-01 | 85.5% | 72.9% |
| 3i7fB02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 39.0 | 2.51e-01 | 100.0% | 14.5% |
| 2kinA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 46.0 | 3.10e-01 | 100.0% | 39.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2718749 | 3867.1.1.1 ↗ | extended segments › Mitochondrial 54S ribosomal protein L31 › Mitochondrial 54S ribosomal protein L31 › Mitochondrial 54S ribosomal protein L31 › L31 | 0.64 | 49.0 | 4.20e-01 | 100.0% | 52.0% |
| 4003121 | 377.1.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C4 | 0.60 | 45.0 | 5.01e-01 | 93.5% | 100.0% |
| 3320579 | 601.18.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ | 0.56 | 48.0 | 3.71e-01 | 98.4% | 83.1% |
| 5038705 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.52 | 43.0 | 2.81e-01 | 91.9% | 62.6% |
| 4318655 | 2003.1.5.174 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 | 0.52 | 45.0 | 2.82e-01 | 100.0% | 38.4% |
| 4959344 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.50 | 36.0 | 2.49e-01 | 75.8% | 30.5% |