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NC_070837.1__YP_010656328.1__PP640_gp42__00042
Bact-VirNC_070837.1__YP_010656328.1__PP640_gp42__00042
Identity
- Accession:
- NC_070837 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 2419957
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-130
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.59 | 31.0 | 4.27e-01 | 86.9% | 100.0% |
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 35.0 | 3.96e-01 | 97.7% | 83.8% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 32.0 | 3.98e-01 | 94.6% | 100.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4162668 | 308.1.1.1 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 | 0.58 | 34.0 | 4.03e-01 | 90.8% | 84.3% |
| 3958135 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.56 | 33.0 | 4.06e-01 | 90.8% | 93.8% |
| 4974520 | 205.1.1.19 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 | 0.55 | 28.0 | 3.82e-01 | 89.2% | 100.0% |
| 5059430 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 33.0 | 4.13e-01 | 93.1% | 100.0% |
| 4044550 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.54 | 33.0 | 4.02e-01 | 94.6% | 97.5% |
| 4547531 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.53 | 34.0 | 4.15e-01 | 92.3% | 100.0% |
| 5068884 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 31.0 | 3.88e-01 | 90.8% | 100.0% |
| 3798494 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 30.0 | 3.54e-01 | 96.2% | 81.1% |
| 5023213 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 29.0 | 3.77e-01 | 88.5% | 100.0% |
| 5032235 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 33.0 | 4.00e-01 | 94.6% | 98.8% |
| 5024124 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.51 | 31.0 | 3.92e-01 | 93.1% | 98.8% |