←Back to structures

NC_070842.1__YP_010657016.1__PP654_gp033__00107

Bact-Vir

NC_070842.1__YP_010657016.1__PP654_gp033__00107

Identity

Accession:
NC_070842 ↗
Kingdom:
phage

Quality

67.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Basiliskvirus› Bacillus_phage_v_B-Bak10

TaxID: 2094736

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-105
PDB
D2 medium residues 124-267
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 30.0 4.01e-01 94.4% 83.1%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 30.0 4.11e-01 96.5% 90.5%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 33.0 4.29e-01 96.5% 93.8%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.60 31.0 3.99e-01 77.8% 85.5%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 30.0 4.06e-01 90.3% 92.0%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.59 29.0 4.02e-01 77.1% 100.0%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 26.0 3.60e-01 70.8% 90.1%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 33.0 3.65e-01 92.4% 80.7%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 24.0 2.87e-01 77.8% 64.6%
2bcfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 44.0 3.57e-01 92.4% 88.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3929586 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.65 19.0 3.08e-01 95.8% 66.0%
3236988 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.63 28.0 3.69e-01 77.8% 75.0%
3791861 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.58 28.0 3.70e-01 77.1% 85.3%
4502232 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.56 23.0 3.02e-01 77.8% 66.3%
3794338 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 27.0 3.34e-01 77.8% 77.6%
3846916 331.9.1.8 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.53 28.0 3.16e-01 77.8% 63.5%
3360656 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.52 27.0 2.88e-01 79.2% 55.5%
4358998 223.3.1.2 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.52 40.0 4.11e-01 91.7% 85.9%
3391637 223.1.1.77 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 0.52 33.0 3.84e-01 91.7% 90.3%
1720285 223.1.1.12 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.51 33.0 3.66e-01 95.1% 84.4%
3438388 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 27.0 2.85e-01 78.5% 54.8%
4960515 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.50 32.0 3.56e-01 92.4% 80.0%