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NC_070843.1__YP_010657111.1__PP655_gp087__00087

Bact-Vir

NC_070843.1__YP_010657111.1__PP655_gp087__00087

Identity

Accession:
NC_070843 ↗
Kingdom:
phage

Quality

73.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yihwangvirus› Bacillus_phage_PBC4

TaxID: 1675028

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-60_155-201
PDB
D2 high residues 66-148
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zm5A02 1.10.20.140 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.54 36.0 3.80e-01 80.7% 77.8%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 27.0 3.22e-01 75.9% 82.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3455407 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 34.0 3.98e-01 71.1% 69.1%
3682108 377.1.1.12 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 0.67 32.0 3.94e-01 88.0% 72.0%
3454767 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 33.0 3.92e-01 71.1% 69.1%
3334149 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 31.0 3.70e-01 78.3% 76.4%
3422646 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 31.0 3.61e-01 78.3% 70.0%
3814136 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 31.0 3.58e-01 77.1% 76.4%
3666467 6108.1.1.0 ↗ alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins 0.56 39.0 2.34e-01 72.3% 28.7%
3232394 109.4.1.264 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 0.55 35.0 2.33e-01 77.1% 16.4%
4650016 3949.1.1.1 ↗ alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT 0.53 35.0 3.83e-01 86.7% 87.7%
3467989 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 27.0 3.11e-01 75.9% 66.7%
4063029 218.2.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.51 36.0 3.59e-01 75.9% 81.1%