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NC_070844.1__YP_010657201.1__PP656_gp075__00054

Bact-Vir

Identity

Accession:: NC_070844 ↗
Kingdom:: phage

Quality

80.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yihwangvirus› Bacillus_phage_pW4

TaxID: 2500560

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-57

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2douA02	3.40.640.10	Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain)	0.65	53.0	3.51e-01	89.3%	94.5%
1d2fA02	3.40.640.10	Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain)	0.60	51.0	3.41e-01	100.0%	94.2%
4pg4A02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.59	51.0	3.65e-01	94.6%	75.2%
1jlcB04	3.30.70.270	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain	0.58	41.0	3.91e-01	73.2%	90.6%
3dsbA01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.57	51.0	4.19e-01	100.0%	55.4%
8dqoB02	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.57	45.0	2.99e-01	85.7%	87.5%
5t3eB02	3.30.559.30	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain	0.57	46.0	3.17e-01	100.0%	66.1%
1dp7P00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	44.0	4.06e-01	89.3%	76.3%
6n8eA02	3.30.559.30	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain	0.55	47.0	3.12e-01	96.4%	61.2%
1pwkA00	3.30.740.10	Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	0.53	41.0	3.53e-01	85.7%	59.3%
7ylzA01	3.60.20.10	Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain	0.50	34.0	2.35e-01	71.4%	92.2%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3706447	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.73	64.0	5.00e-01	98.2%	65.0%
3781277	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.71	60.0	5.00e-01	92.9%	64.9%
3930805	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.69	57.0	4.91e-01	92.9%	58.8%
3619483	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.69	58.0	4.81e-01	94.6%	58.0%
3204194	101.1.2.86 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1	0.58	51.0	4.26e-01	98.2%	72.6%
4882462	210.1.1.1 ↗	a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome	0.56	44.0	3.73e-01	87.5%	50.5%
5018703	815.1.1.0 ↗	a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1	0.56	39.0	3.38e-01	82.1%	45.6%
4027206	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.56	46.0	3.46e-01	91.1%	42.9%
4550629	323.1.1.7 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase	0.52	41.0	2.78e-01	98.2%	75.3%
None	—		0.52	41.0	2.73e-01	87.5%	39.2%
3357957	7102.1.1.2 ↗	a+b three layers › C-terminal segment in 5'->3' exoribonucleases › C-terminal segment in 5'->3' exoribonucleases › C-terminal segment in 5'->3' exoribonucleases › XRN_M	0.51	34.0	2.99e-01	89.3%	43.3%