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NC_070848.1__YP_010657554.1__PP741_gp106__00012
Bact-VirNC_070848.1__YP_010657554.1__PP741_gp106__00012
Identity
- Accession:
- NC_070848 ↗
- Kingdom:
- phage
Quality
55.5
mean pLDDT
Taxonomy
TaxID: 2859072
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-98
D2
high
residues 124-210
Domain cluster:
rep: KJ018211.1__AHK11613.1__S140_206__00203__D98-186
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4brvA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.66 | 39.0 | 3.46e-01 | 100.0% | 41.1% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.65 | 43.0 | 3.44e-01 | 100.0% | 33.7% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.62 | 41.0 | 3.23e-01 | 100.0% | 32.8% |
| 4yokA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 39.0 | 3.73e-01 | 100.0% | 55.2% |
| 3hn5A02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 4.00e-01 | 100.0% | 60.0% |
| 3unpA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 36.0 | 2.80e-01 | 100.0% | 27.5% |
| 1wz3A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 33.0 | 3.55e-01 | 92.0% | 66.2% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.57 | 38.0 | 3.77e-01 | 70.1% | 90.5% |
| 4nv1E01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.55 | 37.0 | 2.96e-01 | 70.1% | 33.9% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.38e-01 | 73.6% | 81.5% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.53 | 30.0 | 3.48e-01 | 80.5% | 80.0% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.04e-01 | 100.0% | 45.5% |
| 3cniA00 | 3.40.1710.10 | Alpha Beta › 3-Layer(aba) Sandwich › abc type-2 transporter like fold › abc type-2 transporter like domain | 0.52 | 43.0 | 3.69e-01 | 92.0% | 82.8% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.40e-01 | 100.0% | 63.0% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 43.0 | 4.03e-01 | 95.4% | 90.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732370 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 41.0 | 4.75e-01 | 100.0% | 88.3% |
| 5047502 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 35.0 | 2.99e-01 | 70.1% | 32.1% |
| 4029036 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 41.0 | 4.14e-01 | 100.0% | 71.1% |
| 3881165 | 11.1.1.232 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SKICH | 0.59 | 38.0 | 3.53e-01 | 100.0% | 50.9% |
| 145833 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.58 | 36.0 | 2.80e-01 | 100.0% | 27.5% |
| 4981567 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.58 | 42.0 | 3.80e-01 | 100.0% | 54.4% |
| 4977402 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 38.0 | 3.28e-01 | 70.1% | 47.6% |
| 4952411 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.56 | 44.0 | 3.34e-01 | 86.2% | 60.0% |
| 5072591 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 36.0 | 3.36e-01 | 71.3% | 93.0% |
| 1518824 | 7523.1.1.22 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 | 0.52 | 43.0 | 3.69e-01 | 92.0% | 82.8% |
| 4455503 | 11.1.1.232 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SKICH | 0.52 | 36.0 | 3.15e-01 | 100.0% | 45.9% |
| 4945628 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 35.0 | 3.08e-01 | 70.1% | 77.9% |
| 5051049 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 37.0 | 3.28e-01 | 73.6% | 88.8% |
| 3871961 | 5001.1.1.43 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › V1R | 0.52 | 43.0 | 3.07e-01 | 97.7% | 62.3% |
| 5072525 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 35.0 | 3.16e-01 | 70.1% | 84.7% |
| 5073557 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 35.0 | 3.04e-01 | 70.1% | 79.3% |
| 1758438 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 35.0 | 3.34e-01 | 100.0% | 60.0% |