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NC_070856.1__YP_010658352.1__PP750_gp42__00042
Bact-VirNC_070856.1__YP_010658352.1__PP750_gp42__00042
Identity
- Accession:
- NC_070856 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
TaxID: 2836132
Cluster
View cluster (40 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-82
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 36.0 | 2.82e-01 | 100.0% | 25.4% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.64 | 34.0 | 3.92e-01 | 70.8% | 71.7% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.63 | 43.0 | 4.12e-01 | 70.8% | 77.3% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.56 | 39.0 | 3.48e-01 | 75.4% | 86.9% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 3.35e-01 | 83.1% | 76.3% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 44.0 | 3.48e-01 | 98.5% | 79.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 33.0 | 3.49e-01 | 70.8% | 70.7% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.53 | 33.0 | 2.41e-01 | 95.4% | 20.9% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.51 | 35.0 | 3.47e-01 | 72.3% | 91.5% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.51 | 37.0 | 3.80e-01 | 76.9% | 88.9% |
| 3kzqA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 40.0 | 2.87e-01 | 87.7% | 91.7% |
| 3ecqA01 | 2.60.120.870 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 39.0 | 3.01e-01 | 92.3% | 63.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 227631 | 3282.1.1.1 ↗ | a+b complex topology › LidA › LidA › LidA › LidA_Long_CC | 0.64 | 36.0 | 2.30e-01 | 100.0% | 10.7% |
| 1759624 | 3282.1.1.1 ↗ | a+b complex topology › LidA › LidA › LidA › LidA_Long_CC | 0.63 | 36.0 | 2.10e-01 | 100.0% | 6.8% |
| 3929201 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 38.0 | 4.32e-01 | 83.1% | 85.7% |
| 3507069 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.58 | 51.0 | 4.09e-01 | 100.0% | 88.5% |
| 3325373 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.57 | 44.0 | 2.67e-01 | 84.6% | 48.7% |
| 3264641 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.57 | 45.0 | 2.70e-01 | 86.2% | 44.4% |
| 5044270 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.56 | 46.0 | 3.44e-01 | 96.9% | 76.8% |
| 3724224 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.56 | 40.0 | 3.63e-01 | 76.9% | 78.9% |
| 3275056 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 47.0 | 3.37e-01 | 96.9% | 49.5% |
| 3437437 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.54 | 46.0 | 3.99e-01 | 96.9% | 93.3% |
| 3593574 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 42.0 | 2.69e-01 | 90.8% | 32.9% |
| 4162022 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.51 | 37.0 | 3.52e-01 | 80.0% | 100.0% |
| 3629580 | 2485.1.1.101 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF31104 | 0.50 | 38.0 | 3.19e-01 | 86.2% | 75.2% |