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NC_070871.1__YP_010659727.1__PP765_gp54__00054
Bact-VirNC_070871.1__YP_010659727.1__PP765_gp54__00054
Identity
- Accession:
- NC_070871 ↗
- Kingdom:
- phage
Quality
94.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Gamaleyavirus›
Escherichia_phage_PGN829.1
TaxID: 2315696
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-73
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.72 | 46.0 | 3.78e-01 | 82.2% | 38.8% |
| 1w2wA00 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.72 | 54.0 | 3.84e-01 | 79.5% | 27.6% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 42.0 | 3.39e-01 | 72.6% | 51.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254551 | 386.1.1.10 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › MAT1 | 0.75 | 51.0 | 4.66e-01 | 71.2% | 97.9% |
| 4223385 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.71 | 62.0 | 5.65e-01 | 100.0% | 72.0% |