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NC_070876.1__YP_010660308.1__PP899_gp17__00017
Bact-VirNC_070876.1__YP_010660308.1__PP899_gp17__00017
Identity
- Accession:
- NC_070876 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
TaxID: 2024265
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-54
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.67 | 46.0 | 3.71e-01 | 73.3% | 39.6% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 2.63e-01 | 100.0% | 56.4% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 40.0 | 3.42e-01 | 88.9% | 77.6% |
| 2opcA00 | 2.60.40.2510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.21e-01 | 95.6% | 66.1% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.51 | 34.0 | 2.65e-01 | 80.0% | 30.7% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.51 | 42.0 | 2.94e-01 | 97.8% | 61.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4615993 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.83 | 67.0 | 5.69e-01 | 100.0% | 55.7% |
| 4329130 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.83 | 67.0 | 6.48e-01 | 100.0% | 78.0% |
| 3966297 | 4313.1.1.0 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like | 0.83 | 67.0 | 6.03e-01 | 100.0% | 65.0% |
| 4121883 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.82 | 67.0 | 5.56e-01 | 100.0% | 52.0% |
| 5019486 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.69 | 50.0 | 3.67e-01 | 77.8% | 48.3% |
| 4867166 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 42.0 | 4.42e-01 | 71.1% | 89.5% |
| 3472863 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.52 | 43.0 | 3.31e-01 | 100.0% | 84.7% |
| 3365872 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.51 | 40.0 | 2.56e-01 | 86.7% | 28.6% |