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NC_070877.1__YP_010660384.1__PP914_gp018__00018
Bact-VirNC_070877.1__YP_010660384.1__PP914_gp018__00018
Identity
- Accession:
- NC_070877 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
TaxID: 2603260
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-108
D2
medium
residues 111-170_257-303
Domain cluster:
rep: NC_070877.1__YP_010660391.1__PP914_gp025__00025__D229-295_396-444
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k6lG00 | 3.90.210.10 | Alpha Beta › Alpha-Beta Complex › Heat-Labile Enterotoxin; Chain A › Heat-Labile Enterotoxin, subunit A | 0.66 | 57.0 | 4.49e-01 | 94.4% | 82.1% |
| 3louA02 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.62 | 41.0 | 3.37e-01 | 92.5% | 37.1% |
| 2hw2A00 | 3.20.170.40 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Rifampin ADP-ribosyltransferase domain | 0.61 | 53.0 | 4.86e-01 | 95.3% | 81.9% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 28.0 | 3.32e-01 | 87.9% | 78.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3176205 | 237.1.1.37 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PF27671 | 0.72 | 67.0 | 5.01e-01 | 98.1% | 64.6% |
| 3256269 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.71 | 56.0 | 5.71e-01 | 83.2% | 100.0% |
| 3879371 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.70 | 56.0 | 4.68e-01 | 85.0% | 68.9% |
| 3694624 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.69 | 57.0 | 4.29e-01 | 88.8% | 66.0% |
| 4014210 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.68 | 56.0 | 4.33e-01 | 87.9% | 72.4% |
| 3833168 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.67 | 57.0 | 4.15e-01 | 91.6% | 55.2% |
| 3185451 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.67 | 56.0 | 4.50e-01 | 88.8% | 60.5% |
| 3845768 | 11.1.1.21 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac | 0.55 | 42.0 | 4.18e-01 | 91.6% | 78.2% |
D3
medium
residues 172-251
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 32.0 | 3.64e-01 | 71.2% | 65.6% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 38.0 | 4.20e-01 | 75.0% | 85.5% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 31.0 | 3.56e-01 | 70.0% | 71.4% |
| 4b4yA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 45.0 | 3.75e-01 | 100.0% | 70.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3201922 | 101.1.3.15 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-binding | 0.57 | 29.0 | 3.19e-01 | 76.2% | 55.4% |
| 3486933 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 30.0 | 3.05e-01 | 77.5% | 48.8% |
| 3677431 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.56 | 40.0 | 2.99e-01 | 75.0% | 67.0% |
| 5049590 | 1015.1.1.2 ↗ | alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Caroten_synth | 0.55 | 45.0 | 3.09e-01 | 92.5% | 88.5% |
| 4361149 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 37.0 | 3.46e-01 | 76.2% | 84.8% |
| 3718415 | 102.1.3.19 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › PF26180 | 0.50 | 43.0 | 3.22e-01 | 98.8% | 67.7% |