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NC_070877.1__YP_010660489.1__PP914_gp123__00123
Bact-VirNC_070877.1__YP_010660489.1__PP914_gp123__00123
Identity
- Accession:
- NC_070877 ↗
- Kingdom:
- phage
Quality
65.3
mean pLDDT
Taxonomy
TaxID: 2603260
Cluster
View cluster (40 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-39_51-92
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 34.0 | 3.84e-01 | 80.3% | 76.2% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 3.63e-01 | 86.9% | 77.0% |
| 3opyB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 42.0 | 3.34e-01 | 77.0% | 83.0% |
| 3lnbA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.57 | 46.0 | 3.11e-01 | 91.8% | 42.9% |
| 4fchA02 | 2.60.40.3610 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.48e-01 | 77.0% | 98.1% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 3.52e-01 | 78.7% | 86.5% |
| 7f13A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 2.94e-01 | 73.8% | 91.7% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 37.0 | 3.33e-01 | 72.1% | 90.5% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 45.0 | 3.39e-01 | 100.0% | 71.8% |
| 1u69D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 42.0 | 3.31e-01 | 95.1% | 64.6% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 40.0 | 4.08e-01 | 91.8% | 96.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3184113 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.56 | 39.0 | 3.45e-01 | 75.4% | 66.0% |
| 3992641 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.54 | 42.0 | 4.07e-01 | 86.9% | 87.1% |
| 3619889 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.54 | 42.0 | 4.07e-01 | 86.9% | 87.1% |
| 4634499 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.54 | 40.0 | 4.07e-01 | 83.6% | 95.0% |
| 4046039 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.53 | 38.0 | 3.44e-01 | 77.0% | 94.1% |
| 5001224 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.52 | 42.0 | 3.12e-01 | 98.4% | 95.4% |
| 3520452 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 31.0 | 3.22e-01 | 91.8% | 67.3% |