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NC_070877.1__YP_010660492.1__PP914_gp126__00126

Bact-Vir

Identity

Accession:: NC_070877 ↗
Kingdom:: phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Quivirus› Arthrobacter_phage_Qui

TaxID: 2603260

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-56

PDB

Domain cluster: rep: OK310503.1__UGL63297.1__SEA_TOKKI_74__00074__D118-169

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF25185.2 best	Tad3	54.0	2.00e-14	100.0%	48.7%

D2 high residues 67-118

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF25185.2 best	Tad3	36.1	6.70e-09	100.0%	37.0%

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4q5eA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.62	43.0	3.83e-01	73.1%	100.0%
3ijcA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.61	49.0	2.94e-01	88.5%	45.4%
4lrjA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.59	40.0	3.71e-01	73.1%	100.0%
6sxtA02	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.57	48.0	3.48e-01	96.2%	53.1%
2k3dA00	3.10.450.130	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains	0.55	40.0	3.46e-01	80.8%	60.9%
3d79A01	3.10.450.120	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1	0.55	45.0	4.08e-01	96.2%	93.2%
1kl9A01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.55	46.0	4.16e-01	98.1%	73.3%
3k50A02	2.30.42.10	Mainly Beta › Roll › Pdz3 Domain › PDZ domain	0.54	46.0	3.80e-01	100.0%	86.0%
2qqzA01	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.54	37.0	3.05e-01	75.0%	77.4%
1ybiA02	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.54	42.0	3.24e-01	92.3%	58.2%
2lnjA00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.54	46.0	3.27e-01	100.0%	77.6%
1v2bB00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.51	43.0	3.19e-01	100.0%	92.7%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3510754	64.1.1.1 ↗	beta meanders › WW domain-like › WW domain › WW domain › WW	0.71	53.0	4.31e-01	80.8%	50.5%
4032160	6043.1.1.0 ↗	a+b two layers › yfeY-like › yfeY-like › yfeY-like	0.68	49.0	4.55e-01	76.9%	69.2%
3815137	902.1.1.4 ↗	few secondary structure elements › Amb V allergen › Amb V allergen › Amb V allergen › ESF1	0.66	45.0	4.98e-01	100.0%	92.5%
3282683	331.3.1.0 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like	0.55	48.0	3.26e-01	100.0%	52.8%
3511278	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	38.0	3.55e-01	80.8%	64.3%
3413033	4099.1.1.0 ↗	a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like	0.50	43.0	3.37e-01	100.0%	66.7%
3700776	292.2.1.0 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain	0.50	39.0	3.66e-01	100.0%	68.6%