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NC_070877.1__YP_010660576.1__PP914_gp210__00210

Bact-Vir

Identity

Accession:: NC_070877 ↗
Kingdom:: phage

Quality

94.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Quivirus› Arthrobacter_phage_Qui

TaxID: 2603260

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-77

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1e0bA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.69	45.0	4.49e-01	95.0%	65.6%
2wweA01	3.30.1520.10	Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain	0.54	39.0	3.32e-01	100.0%	44.2%
2rqtA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.54	33.0	3.38e-01	95.0%	59.0%
4bq6F00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.54	41.0	3.18e-01	86.7%	62.4%
2wtzA02	3.40.1190.10	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain	0.54	43.0	2.96e-01	91.7%	94.0%
4wyqB00	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.53	40.0	3.78e-01	83.3%	93.3%
3kxtA00	2.30.30.610	Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7	0.53	36.0	3.71e-01	88.3%	75.0%
3kbhE00	2.60.40.3130	Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD)	0.52	38.0	3.26e-01	83.3%	77.3%
5jk0B01	1.10.443.10	Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core	0.52	41.0	3.08e-01	91.7%	67.6%
6mlyB01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.50	37.0	2.52e-01	81.7%	30.9%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3790904	4.8.1.2 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow	0.71	45.0	4.59e-01	95.0%	65.0%
3707653	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.68	43.0	4.58e-01	95.0%	76.0%
3396897	4.1.1.54 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_2	0.64	41.0	4.05e-01	93.3%	61.9%
3510029	4.1.1.1 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_1	0.63	37.0	3.79e-01	95.0%	58.3%
4963287	375.1.1.334 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758	0.54	39.0	4.11e-01	78.3%	90.9%
None	—		0.53	37.0	2.45e-01	76.7%	84.2%
4960030	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	36.0	2.88e-01	71.7%	48.9%
3504193	220.1.1.49 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH	0.52	37.0	2.93e-01	75.0%	63.8%
4027679	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.52	37.0	3.15e-01	91.7%	43.8%
4976532	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.52	41.0	3.31e-01	90.0%	50.0%
4029803	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.52	36.0	2.89e-01	91.7%	33.8%
3538408	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.52	37.0	3.22e-01	91.7%	48.4%
4971920	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.51	41.0	3.30e-01	90.0%	52.8%
143426	292.1.1.1 ↗	a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP	0.51	43.0	2.86e-01	96.7%	31.9%