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NC_070882.1__YP_010660909.1__PP933_gp169__00169

Bact-Vir

NC_070882.1__YP_010660909.1__PP933_gp169__00169

Identity

Accession:
NC_070882 ↗
Kingdom:
phage

Quality

72.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Pawinskivirus› Pseudomonas_phage_vB_PaeM_PS119XW

TaxID: 2601632

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 101-151
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 41.0 2.48e-01 76.5% 35.3%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 39.0 2.80e-01 72.5% 65.5%
1z9hA02 6.20.200.30 Special › Other non-globular › Defensin A-like › 0.54 33.0 3.48e-01 72.5% 67.4%
5x9vA01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.51 36.0 2.53e-01 86.3% 49.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474413 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 37.0 2.25e-01 74.5% 28.9%
4000029 5.1.4.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.51 40.0 2.57e-01 98.0% 75.1%
3272533 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 35.0 2.18e-01 72.5% 15.7%
4934465 593.1.1.1 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.51 34.0 2.25e-01 70.6% 76.9%
3499076 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.50 36.0 2.30e-01 86.3% 71.8%
3937068 2004.1.1.417 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 0.50 33.0 1.97e-01 70.6% 43.1%
D2 medium residues 236-286
PDB
D3 medium residues 287-339
PDB