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NC_070882.1__YP_010661059.1__PP933_gp319__00319
Bact-VirNC_070882.1__YP_010661059.1__PP933_gp319__00319
Identity
- Accession:
- NC_070882 ↗
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Pawinskivirus›
Pseudomonas_phage_vB_PaeM_PS119XW
TaxID: 2601632
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-138
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 35.0 | 3.85e-01 | 100.0% | 57.8% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 44.0 | 4.25e-01 | 100.0% | 58.0% |
| 1tvdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 3.96e-01 | 100.0% | 59.5% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.57 | 46.0 | 3.18e-01 | 87.0% | 61.0% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 38.0 | 4.25e-01 | 95.0% | 98.6% |
| 1iyjB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 36.0 | 3.24e-01 | 70.0% | 64.8% |
| 3t4nA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 43.0 | 4.37e-01 | 97.0% | 89.6% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 43.0 | 3.97e-01 | 94.0% | 100.0% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 30.0 | 3.65e-01 | 100.0% | 98.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027310 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.61 | 54.0 | 4.95e-01 | 99.0% | 97.7% |
| 4340143 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 38.0 | 4.33e-01 | 94.0% | 98.6% |
| 4982275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.61e-01 | 100.0% | 54.1% |
| 5079826 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.68e-01 | 79.0% | 86.7% |
| 4465312 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.51 | 41.0 | 3.88e-01 | 100.0% | 73.3% |