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NC_070887.1__YP_010662186.1__PP938_gp036__00036
Bact-VirNC_070887.1__YP_010662186.1__PP938_gp036__00036
Identity
- Accession:
- NC_070887 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Taxonomy
TaxID: 2763529
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-84
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tljB00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.65 | 44.0 | 3.25e-01 | 100.0% | 27.1% |
| 6tr4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 40.0 | 3.29e-01 | 100.0% | 35.1% |
| 4xl1E01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 53.0 | 4.15e-01 | 97.3% | 96.8% |
| 6a48A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 43.0 | 3.36e-01 | 100.0% | 36.3% |
| 5wfiA01 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 43.0 | 3.68e-01 | 98.6% | 45.5% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.58 | 40.0 | 4.21e-01 | 100.0% | 82.5% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 51.0 | 4.63e-01 | 100.0% | 98.0% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 49.0 | 4.50e-01 | 97.3% | 92.6% |
| 7bi2A02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 46.0 | 3.91e-01 | 97.3% | 89.4% |
| 5eliA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.62e-01 | 86.3% | 57.1% |
| 5tf0B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 3.97e-01 | 100.0% | 63.1% |
| 2x41A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 45.0 | 3.78e-01 | 100.0% | 58.8% |
| 4iihB04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 45.0 | 3.96e-01 | 100.0% | 66.4% |
| 5z9sA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.70e-01 | 100.0% | 56.9% |
| 2qg3A00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.50 | 44.0 | 3.27e-01 | 100.0% | 66.0% |
| 2pttB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.49e-01 | 100.0% | 59.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955086 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.70 | 45.0 | 3.29e-01 | 100.0% | 25.9% |
| 4982909 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.69 | 46.0 | 3.40e-01 | 100.0% | 27.0% |
| 4307740 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.63 | 39.0 | 3.64e-01 | 100.0% | 50.0% |
| 3194942 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 42.0 | 3.37e-01 | 100.0% | 35.7% |
| 5054796 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.58 | 50.0 | 4.14e-01 | 98.6% | 84.4% |
| 5039578 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.83e-01 | 100.0% | 56.2% |
| 3459577 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.57 | 38.0 | 2.99e-01 | 100.0% | 30.9% |
| 3838346 | 589.1.1.19 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › Rotamase_2 | 0.55 | 46.0 | 3.38e-01 | 98.6% | 96.5% |
| 5057754 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.53 | 37.0 | 3.29e-01 | 71.2% | 79.0% |
| 3259122 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.52 | 37.0 | 3.23e-01 | 100.0% | 47.8% |
| 4011218 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.65e-01 | 100.0% | 51.1% |
| 3212601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.05e-01 | 100.0% | 40.0% |
| 4932386 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.51 | 45.0 | 3.32e-01 | 100.0% | 71.3% |
| 4021418 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 3.64e-01 | 100.0% | 52.6% |
| 5043482 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.50 | 43.0 | 3.28e-01 | 100.0% | 71.1% |