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NC_070889.1__YP_010662885.1__PP940_gp207__00207
Bact-VirNC_070889.1__YP_010662885.1__PP940_gp207__00207
Identity
- Accession:
- NC_070889 ↗
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Taxonomy
TaxID: 103371
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-65
Domain cluster:
rep: OP172801.1__WAX15476.1__EG103P1_00012__00012__D140-197
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n4kA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.71 | 63.0 | 4.82e-01 | 100.0% | 97.2% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.69 | 61.0 | 4.72e-01 | 100.0% | 93.4% |
| 1hwmB02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 59.0 | 4.68e-01 | 100.0% | 97.6% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 43.0 | 2.89e-01 | 100.0% | 86.9% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.32e-01 | 77.4% | 86.0% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 2.50e-01 | 100.0% | 14.7% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.50 | 36.0 | 2.94e-01 | 80.6% | 73.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3457561 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.74 | 68.0 | 4.85e-01 | 100.0% | 82.9% |
| 4674853 | 6.1.1.11 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin | 0.70 | 60.0 | 4.85e-01 | 98.4% | 94.4% |
| 4170191 | 6.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA | 0.66 | 58.0 | 4.28e-01 | 100.0% | 88.5% |
| 3490493 | 708.1.1.9 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 | 0.62 | 44.0 | 3.25e-01 | 79.0% | 69.5% |
| 3969097 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.61 | 33.0 | 3.62e-01 | 82.3% | 64.0% |
| 3924546 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 36.0 | 2.82e-01 | 91.9% | 29.2% |
| 3967616 | 2003.1.2.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 | 0.57 | 50.0 | 3.10e-01 | 100.0% | 22.3% |
| 3639262 | 2003.1.2.103 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase, NAD_binding_8 | 0.56 | 38.0 | 2.33e-01 | 98.4% | 10.5% |
| 4958638 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.56 | 42.0 | 4.29e-01 | 91.9% | 85.0% |
| 3479395 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.56 | 29.0 | 3.79e-01 | 77.4% | 97.0% |
| 1826884 | 4.1.1.84 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_7 | 0.55 | 33.0 | 3.16e-01 | 96.8% | 49.3% |
| 5054507 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 43.0 | 4.12e-01 | 96.8% | 73.3% |
| 3303184 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 38.0 | 2.40e-01 | 79.0% | 41.2% |
| 4963421 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.53 | 39.0 | 4.01e-01 | 90.3% | 85.0% |
| 4373440 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.53 | 37.0 | 3.29e-01 | 74.2% | 98.9% |
| 3962934 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.52 | 43.0 | 3.67e-01 | 93.5% | 75.2% |
| 4054678 | 601.51.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin | 0.51 | 37.0 | 2.35e-01 | 91.9% | 12.7% |
| 3692851 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 42.0 | 3.94e-01 | 96.8% | 100.0% |