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NC_070889.1__YP_010662887.1__PP940_gp209__00209

Bact-Vir

NC_070889.1__YP_010662887.1__PP940_gp209__00209

Identity

Accession:
NC_070889 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pootjesviridae› Innesvirus› Rhizobium_phage_RL2RES

TaxID: 103371

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-133
PDB
Domain cluster: rep: MG592662.1__AUS01959.1__NVP2058O_042__00042__D1-148
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.60 31.0 4.03e-01 73.7% 92.8%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.84e-01 72.9% 74.8%
2xvsA00 2.40.50.550 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 36.0 3.42e-01 72.2% 69.3%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.62e-01 75.9% 72.1%
2e8gA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 34.0 3.56e-01 74.4% 76.7%
3eo5A01 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.50 29.0 3.53e-01 92.5% 87.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3929663 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 41.0 4.16e-01 71.4% 86.9%
3243378 2.1.1.347 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30115 0.57 35.0 4.00e-01 74.4% 82.7%
3228963 2.1.1.311 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 0.56 38.0 4.24e-01 78.2% 91.0%
5031673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 27.0 3.04e-01 72.9% 56.2%
3797107 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 36.0 4.11e-01 74.4% 95.8%
3278700 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 3.71e-01 80.5% 86.9%
3220752 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 36.0 3.86e-01 72.2% 99.1%
3473720 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.51 35.0 3.85e-01 72.2% 100.0%
5041370 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 32.0 3.51e-01 72.9% 77.3%